Comparative genomics reveals insights into avian genome evolution and adaptation

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dc.contributor.authorZhang, Guojie
dc.contributor.authorLi, Cai
dc.contributor.authorLi, Qiye
dc.contributor.authorLi, Bo
dc.contributor.authorLarkin, Denis M.
dc.contributor.authorLee, Chul
dc.contributor.authorStorz, Jay F.
dc.contributor.authorAntunes, Agostinho
dc.contributor.authorGreenwold, Matthew J.
dc.contributor.authorMeredith, Robert W.
dc.contributor.authorÖdeen, Anders
dc.contributor.authorCui, Jie
dc.contributor.authorZhou, Qi
dc.contributor.authorXu, Luohao
dc.contributor.authorPan, Hailin
dc.contributor.authorWang, Zongji
dc.contributor.authorJin, Lijun
dc.contributor.authorZhang, Pei
dc.contributor.authorHu, Haofu
dc.contributor.authorYang, Wei
dc.contributor.authorHu, Jiang
dc.contributor.authorXiao, Jin
dc.contributor.authorYang, Zhikai
dc.contributor.authorLiu, Yang
dc.contributor.authorXie, Qiaolin
dc.contributor.authorYu, Hao
dc.contributor.authorLian, Jinmin
dc.contributor.authorWen, Ping
dc.contributor.authorZhang, Fang
dc.contributor.authorLi, Hui
dc.contributor.authorZeng, Yongli
dc.contributor.authorXiong, Zijun
dc.contributor.authorLiu, Shiping
dc.contributor.authorZhou, Long
dc.contributor.authorHuang, Zhiyong
dc.contributor.authorAn, Na
dc.contributor.authorWang, Jie
dc.contributor.authorZheng, Qiumei
dc.contributor.authorXiong, Yingqi
dc.contributor.authorWang, Guangbiao
dc.contributor.authorWang, Bo
dc.contributor.authorWang, Jingjing
dc.contributor.authorFan, Yu
dc.contributor.authorFonseca, Rute R. da
dc.contributor.authorAlfaro-Núñez, Alonzo
dc.contributor.authorSchubert, Mikkel
dc.contributor.authorOrlando, Ludovic
dc.contributor.authorMourier, Tobias
dc.contributor.authorHoward, Jason T.
dc.contributor.authorGanapathy, Ganeshkumar
dc.contributor.authorPfenning, Andreas
dc.contributor.authorWhitney, Osceola
dc.contributor.authorRivas, Miriam V.
dc.contributor.authorHara, Erina
dc.contributor.authorSmith, Julia
dc.contributor.authorFarré, Marta
dc.contributor.authorNarayan, Jitendra
dc.contributor.authorSlavov, Gancho
dc.contributor.authorRomanov, Michael N.
dc.contributor.authorBorges, Rui
dc.contributor.authorMachado, João Paulo
dc.contributor.authorKhan, Imran
dc.contributor.authorSpringer, Mark S.
dc.contributor.authorGatesy, John
dc.contributor.authorHoffmann, Federico G.
dc.contributor.authorOpazo, Juan C.
dc.contributor.authorHåstad, Olle
dc.contributor.authorSawyer, Roger H.
dc.contributor.authorKim, Heebal
dc.contributor.authorKim, Kyu-Won
dc.contributor.authorKim, Hyeon Jeong
dc.contributor.authorCho, Seoae
dc.contributor.authorLi, Ning
dc.contributor.authorHuang, Yinhua
dc.contributor.authorBruford, Michael W.
dc.contributor.authorZhan, Xiangjiang
dc.contributor.authorDixon, Andrew
dc.contributor.authorBertelsen, Mads F.
dc.contributor.authorDerryberry, Elizabeth P.
dc.contributor.authorWarren, Wesley
dc.contributor.authorWilson, Richard K.
dc.contributor.authorLi, Shengbin
dc.contributor.authorRay, David A.
dc.contributor.authorGreen, Richard E.
dc.contributor.authorO'Brien, Stephen J.
dc.contributor.authorGriffin, Darren
dc.contributor.authorJohnson, Warren E.
dc.contributor.authorHaussler, David
dc.contributor.authorRyder, Oliver A.
dc.contributor.authorWillerslev, Eske
dc.contributor.authorGraves, Gary R.
dc.contributor.authorAlström, Per
dc.contributor.authorFjeldså, Jon
dc.contributor.authorMindell, David P.
dc.contributor.authorEdwards, Scott V.
dc.contributor.authorBraun, Edward L.
dc.contributor.authorRahbek, Carsten
dc.contributor.authorBurt, David W.
dc.contributor.authorHoude, Peter
dc.contributor.authorZhang, Yong
dc.contributor.authorYang, Huanming
dc.contributor.authorWang, Jian
dc.contributor.authorJarvis, Erich D.
dc.contributor.authorGilbert, M. T.
dc.contributor.authorWang, Jun
dc.contributor.authorYe, Chen
dc.contributor.authorLiang, Shaoguang
dc.contributor.authorYan, Zengli
dc.contributor.authorZepeda, M. L.
dc.contributor.authorCampos, Paula F.
dc.contributor.authorVelazquez, Amhed Missael Vargas
dc.contributor.authorSamaniego, José Alfredo
dc.contributor.authorAvila-Arcos, Mar
dc.contributor.authorMartin, Michael D.
dc.contributor.authorBarnett, Ross
dc.contributor.authorRibeiro, Angela M.
dc.contributor.authorMello, Claudio V.
dc.contributor.authorLovell, Peter V.
dc.contributor.authorAlmeida, Daniela
dc.contributor.authorMaldonado, Emanuel
dc.contributor.authorPereira, Joana
dc.contributor.authorSunagar, Kartik
dc.contributor.authorPhilip, Siby
dc.contributor.authorDominguez-Bello, Maria
dc.contributor.authorBunce, Michael
dc.contributor.authorLambert, David
dc.contributor.authorBrumfield, Robb T.
dc.contributor.authorSheldon, Frederick H.
dc.contributor.authorHolmes, Edward C.
dc.contributor.authorGardner, Paul P.
dc.contributor.authorSteeves, Tammy E.
dc.contributor.authorStadler, Peter F.
dc.contributor.authorBurge, Sarah W.
dc.contributor.authorLyons, Eric
dc.contributor.authorSmith, Jacqueline
dc.contributor.authorMcCarthy, Fiona
dc.contributor.authorPitel, Frederique
dc.contributor.authorRhoads, Douglas
dc.contributor.authorFroman, David P.
dc.date.accessioned2015-04-20T15:15:47Z
dc.date.available2015-04-20T15:15:47Z
dc.date.issued2014
dc.description.abstractBirds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. The avian genome is principally characterized by its constrained size, which predominantly arose because of lineage-specific erosion of repetitive elements, large segmental deletions, and gene loss. Avian genomes furthermore show a remarkably high degree of evolutionary stasis at the levels of nucleotide sequence, gene synteny, and chromosomal structure. Despite this pattern of conservation, we detected many non-neutral evolutionary changes in protein-coding genes and noncoding regions. These analyses reveal that pan-avian genomic diversity covaries with adaptations to different lifestyles and convergent evolution of traits.
dc.format.extent1311–1320
dc.identifier0036-8075
dc.identifier.citationZhang, Guojie, Li, Cai, Li, Qiye, Li, Bo, Larkin, Denis M., Lee, Chul, Storz, Jay F., Antunes, Agostinho, Greenwold, Matthew J., Meredith, Robert W., Ödeen, Anders, Cui, Jie, Zhou, Qi, Xu, Luohao, Pan, Hailin, Wang, Zongji, Jin, Lijun, Zhang, Pei, Hu, Haofu, Yang, Wei, Hu, Jiang, Xiao, Jin, Yang, Zhikai, Liu, Yang, Xie, Qiaolin et al. 2014. "<a href="https://repository.si.edu/handle/10088/25531">Comparative genomics reveals insights into avian genome evolution and adaptation</a>." <em>Science</em>, 346, (6215) 1311–1320. <a href="https://doi.org/10.1126/science.1251385">https://doi.org/10.1126/science.1251385</a>.
dc.identifier.issn0036-8075
dc.identifier.urihttp://hdl.handle.net/10088/25531
dc.publisherAmerican Association for the Advancement of Science
dc.relation.ispartofScience 346 (6215)
dc.titleComparative genomics reveals insights into avian genome evolution and adaptation
dc.typearticle
sro.description.unitNH-Vertebrate Zoology
sro.description.unitNMNH
sro.description.unitNZP
sro.identifier.doi10.1126/science.1251385
sro.identifier.itemID133190
sro.identifier.refworksID101139
sro.identifier.urlhttps://repository.si.edu/handle/10088/25531
sro.publicationPlaceWashington, DC

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