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Browsing Research Datasets by Title

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  • Data from: Exploring conflicts in whole genome phylogenetics: A case study within Manakins (Aves: Pipridae) 
    Zhao, Min; Kurtis, Sarah; White, Noor D.; Moncrieff, Andre; Leite, Rafael; Brumfield, Robb; Braun, Edward; Kimball, Rebecca (Dryad, 2021)
    Some phylogenetic problems remain unresolved even when large amounts of sequence data are analyzed and methods that accommodate processes such as incomplete lineage sorting are employed. In addition to investigating ...
  • Data from: Floral evolution and pollinator diversification in Hedychium: revisiting Darwin's predictions using an integrative taxonomic approach 
    Ashokan, Ajith; Leong-Škornicková, Jana; Suksathan, Piyakaset; Newman, Mark; Kress, W. John; Gowda, Vinita (Dryad, 2022)
    Hedychium J.Koenig (Zingiberaceae) is endemic to the Indo-Malayan Realm and is known for its vibrant and fragrant flowers. Historically, two different pollination syndromes characterize Hedychium: diurnal or bird pollination ...
  • Data from: Highly resolved early Eocene food webs show development of modern trophic structure after the end-Cretaceous extinction 
    Labandeira, Conrad C.; Dunne, Jennifer A. (2014)
    Generalities of food web structure have been identified for extant ecosystems. However, the trophic organization of ancient ecosystems is unresolved, as prior studies of fossil webs have been limited by low-resolution, ...
  • Data from: Influences of fire–vegetation feedbacks and post-fire recovery rates on forest landscape vulnerability to altered fire regimes 
    Tepley, Alan J.; Thomann, Enrique; Veblen, Thomas T.; Perry, George L. W.; Holz, Andrés; Paritsis, Juan; Kitzberger, Thomas; Anderson-Teixeira, Kristina J.; Perry, George L. W. (Dryad, 2019)
    1. In the context of on-going climatic warming, forest landscapes face increasing risk of conversion to non-forest vegetation through alteration of their fire regimes and their post-fire recovery dynamics. However, this ...
  • Data from: Insectivorous birds reduce herbivory but do not increase mangrove growth across productivity zones 
    Forde, Alexander J.; Feller, Ilka C.; Parker, John D.; Gruner, Daniel S. (Dryad, 2021)
    Top-down effects of predators and bottom-up effects of resources are important drivers of community structure and function in a wide array of ecosystems. Fertilization experiments impose variation in resource availability ...
  • Data from: Integrating tracking and resight data enables unbiased inferences about migratory connectivity and winter range survival from archival tags 
    Rushing, Clark S.; Van Tatenhove, Aimee M.; Sharp, Andrew; Ruiz-Gutierrez, Viviana; Freeman, Mary C.; Sykes, Paul W., Jr.; Given, Aaron M.; Sillett, T. Scott (Dryad, 2021)
    Archival geolocators have transformed the study of small, migratory organisms but analysis of data from these devices requires bias correction because tags are only recovered from individuals that survive and are re-captured ...
  • Data from: Larger genomes linked to slower development and loss of late-developing traits 
    Womack, Molly C.; Metz, Marissa J.; Hoke, Kim L. (Dryad Digital Repository, 2019)
  • Data from: Larger trees suffer most during drought in forests worldwide 
    Bennett, Amy C.; McDowell, Nathan G.; Allen, Craig D.; Anderson-Teixeira, Kristina J. (Dryad, 2016)
    The frequency of severe droughts is increasing in many regions around the world as a result of climate change. Droughts alter the structure and function of forests. Site- and region-specific studies suggest that large ...
  • Data from: Limitations on orchid recruitment: not a simple picture 
    McCormick, Melissa K.; Taylor, D. Lee; Juhaszova, Katarina; Burnett, Robert K., Jr.; Whigham, Dennis F.; O'Neill, John P. (Dryad Digital Repository, 2011)
    Mycorrhizal fungi have substantial potential to influence plant distribution, especially in specialized orchids and mycoheterotrophic plants. However, little is known about environmental factors that influence the distribution ...
  • Data from: Maintenance of local adaptation despite gene flow in a coastal songbird 
    Clark, Jonathan D.; Luther, David A.; Benham, Phred M.; Maldonado, Jesus E.; Lim, Haw Chuan (Dryad, 2022)
    Adaptation to local environments is common in widespread species and the basis of ecological speciation. The song sparrow (Melospiza melodia) is a widespread, polytypic passerine that occurs in shrubland habitats throughout ...
  • Data from: Monadelpha (Euphorbiaceae, Plukenetieae), a new genus of Tragiinae from the Amazon rainforest of Venezuela and Brazil 
    Gillespie, Lynn J.; Cardinal-McTeague, Warren M.; Wurdack, Kenneth J. (Dryad, 2020)
    Monadelpha L.J.Gillespie & Card.-McTeag., gen. nov., is described as a new member of Euphorbiaceae tribe Plukenetieae subtribe Tragiinae, to accommodate Tragia guayanensis, a species known from western Amazonas, Venezuela ...
  • Data from: Nasal compartmentalization in Kogiidae (Cetacea, Physeteroidea): Insights from a new late Miocene dwarf sperm whale from the Pisco Formation 
    Benites-Palomino, Aldo; Velez-Juarbe, Jorge; Collareta, Alberto; Ochoa, Diana; Altamirano, Ali; Carré, Matthieu; Laime, Manuel J.; Urbina, Mario; Salas-Gismondi, Rodolfo (Dryad, 2020)
    Facial compartmentalization in the skull of extant pygmy whales (Kogiidae) is a unique feature among cetaceans that allows the housing of a wide array of organs responsible for echolocation. Recent fossil findings depict ...
  • Data from: Network analysis of sea turtle movements and connectivity: a tool for conservation prioritization 
    Kot, Connie Y.; Åkesson, Susanne; Alfaro-Shigueto, Joanna; Amorocho Llanos, Diego Fernando; Antonopoulou, Marina; Balazs, George H.; Baverstock, Warren R.; Blumenthal, Janice M.; Broderick, Annette C.; Bruno, Ignacio; Canbolat, Ali Fuat; Casale, Paolo; Cejudo, Daniel; Coyne, Michael S.; Curtice, Corrie; DeLand, Sarah; DiMatteo, Andrew; Dodge, Kara; Dunn, Daniel C.; Esteban, Nicole; Formia, Angela; Fuentes, Mariana M. P. B.; Fujioka, Ei; Garnier, Julie; Godfrey, Matthew H.; Godley, Brendan J.; González Carman, Victoria; Harrison, Autumn-Lynn; Hart, Catherine E.; Hawkes, Lucy A.; Hays, Graeme C.; Hill, Nicholas; Hochscheid, Sandra; Kaska, Yakup; Levy, Yaniv; Ley-Quiñónez, César P.; Lockhart, Gwen G.; López-Mendilaharsu, Milagros; Luschi, Paolo; Mangel, Jeffrey C.; Margaritoulis, Dimitris; Maxwell, Sara M.; McClellan, Catherine M.; Metcalfe, Kristian; Mingozzi, Antonio; Moncada, Felix G.; Nichols, Wallace J.; Parker, Denise M.; Patel, Samir H.; Pilcher, Nicolas J.; Poulin, Sarah; Read, Andrew J.; Rees, ALan F.; Robinson, David P.; Robinson, Nathan J.; Sandoval-Lugo, Alejandra G.; Schofield, Gail; Seminoff, Jeffrey A.; Seney, Erin E.; Snape, Robin T. E.; Sözbilen, Dogan; Tomás, Jesús; Varo-Cruz, Nuria; Wallace, Bryan P.; Wildermann, Natalie E.; Witt, Matthew J.; Zavala-Norzagaray, Alan A.; Halpin, Patrick N. (Dryad, 2022)
    Aim: Understanding the spatial ecology of animal movements is a critical element in conserving long-lived, highly mobile marine species. Analysing networks developed from movements of six sea turtle species reveals marine ...
  • Data from: Patterns of nitrogen-fixing tree abundance in forests across Asia and America 
    Menge, Duncan N. L.; Chisholm, Ryan A.; Davies, Stuart J.; Abu Salim, Kamariah; Allen, David; Alvarez, Mauricio; Bourg, Norm; Brockelman, Warren Y.; Bunyavejchewin, Sarayudh; Butt, Nathalie; Cao, Min; Chanthorn, Wirong; Chao, Wei-Chun; Clay, Keith; Condit, Richard; Cordell, Susan; Da Silva, João Batista; Dattaraja, H. S.; De Andrade, Ana Cristina Segalin; Oliveira, Alexandre A.; Den Ouden, Jan; Drescher, Michael; Fletcher, Christine; Giardina, Christian P.; Gunatilleke, C. V. Savitri; Gunatilleke, I. A. U. Nimal; Hau, Billy C. H.; He, Fangliang; Howe, Robert; Hsieh, Chang-Fu; Hubbell, Stephen P.; Inman-Narahari, Faith M.; Jansen, Patrick A.; Johnson, Daniel J.; Kong, Lee Sing; Kral, Kamil; Ku, Chen-Chia; Lai, Jiangshan; Larson, Andrew J.; Li, Xiankun; Li, Yide; Lin, Luxiang; Lin, Yiching; Liu, Shirong; Lum, Shawn K. M.; Lutz, James A.; Ma, Keping; Malhi, Yadvinder; McMahon, Sean; McShea, William; Mi, Xiangcheng; Morecroft, Michael; Myers, Jonathan A.; Nathalang, Anuttara; Novotny, Vojtech; Ong, Perry; Orwig, David A.; Ostertag, Rebecca; Parker, Geoffrey; Phillips, Richard P.; Rahman, Kassim Abd; Sack, Lawren; Sang, Weiguo; Shen, Guochun; Shringi, Ankur; Shue, Jessica; Su, Sheng-Hsin; Sukumar, Raman; Sun, I-Fang; Suresh, H. S.; Tan, Sylvester; Thomas, Sean C.; Toko, Pagi S.; Valencia, Renato; Vallejo, Martha I.; Vicentini, Alberto; Vrška, Tomáš; Wang, Bin; Wang, Xihua; Weiblen, George D.; Wolf, Amy; Xu, Han; Yap, Sandra; Zhu, Li; Fung, Tak (Dryad, 2019)
    Symbiotic nitrogen (N)-fixing trees can provide large quantities of new N to ecosystems, but only if they are sufficiently abundant. The overall abundance and latitudinal abundance distributions of N-fixing trees are well ...
  • Data from: Phylogeny of gracillariid leaf-mining moths: evolution of larval behaviour inferred from phylogenomic and Sanger data 
    Li, Xuankun; St Laurent, Ryan; Earl, Chandra; Doorenweerd, Camiel; Van Nieukerken, Erik J.; Davis, Donald R.; Kawakita, Atsushi; Kobayashi, Shigeki; Zwick, Andreas; Lopez-Vaamonde, Carlos; Ohshima, Issei; Kawahara, Akito Y. (Dryad, 2021)
    Gracillariidae is the most taxonomically diverse cosmopolitan leaf-mining moth family, consisting of nearly 2000 named species in 105 described genera, classified into eight extant subfamilies. The majority of gracillariid ...
  • Data from: Rapid radiation in a highly diverse marine environment 
    Hench, Kosmas; McMillan, W. Owen; Puebla, Oscar; Helmkampf, Martin (Dryad, 2020)
    Rapid diversification is often observed when founding species invade isolated or newly formed habitats that provide ecological opportunity for adaptive radiation. However, most of the Earth's diversity arose in diverse ...
  • Data from: Root volume distribution of maturing perennial grasses revealed by correcting for minirhizotron surface effects 
    Black, Christopher K.; Masters, Michael D.; LeBauer, David S.; Anderson-Teixeira, Kristina J.; DeLucia, Evan H. (Dryad, 2018)
    Aims: Root architecture drives plant ecology and physiology, but current detection methods limit understanding of root placement within soil profiles. We developed a statistical model of root volume along depth gradients ...
  • Data from: Size-related scaling of tree form and function in a mixed-age forest 
    Anderson-Teixeira, Kristina J.; McGarvey, Jennifer C.; Muller-Landau, Helene C.; Park, Janice Y.; González-Akre, Erika B.; Herrmann, Valentine; Bennett, Amy C.; So, Christopher V.; Bourg, Norman A.; Thompson, Jonathan R.; McMahon, Sean M.; McShea, William J. (Dryad Digital Repository, 2016)
    Many morphological, physiological and ecological traits of trees scale with diameter, shaping the structure and function of forest ecosystems. Understanding the mechanistic basis for such scaling relationships is key to ...
  • Data from: Taxonomy of deep-sea trachyleberidid, thaerocytherid, and hemicytherid genera (Ostracoda) Action Action 
    Yasuhara, Moriaki; Hunt, Gene; Okahashi, Hisayo; Brandão, Simone N. (Dryad Digital Repository, 2015)
    We conducted a comprehensive systematic revision of deep-sea Trachyleberididae, Thaerocytheridae, and Hemicytheridae (Ostracoda, Crustacea) covering almost all Cenozoic genera using high-resolution scanning electron ...
  • Data from: The role of taxonomic expertise in interpretation of metabarcoding studies 
    Pappalardo, Paula; Collins, Allen G.; Pagenkopp Lohan, Katrina M.; Hanson, Kate M.; Truskey, Sarit B.; Jaeckle, William; Lewis Ames, Cheryl; Goodheart, Jessica A.; Bush, Stephanie L.; Biancani, Leann M.; Strong, Ellen E.; Vecchione, Michael; Harasewych, M. G.; Reed, Karen; Lin, Chan; Hartil, Elise; Whelpley, Jessica; Blumberg, Jamie; Matterson, Kenan; Redmond, Niamh E.; Becker, Allison; Boyle, Michael J.; Osborn, Karen J. (Dryad, 2021)
    The performance of DNA metabarcoding approaches for characterizing biodiversity can be influenced by multiple factors. Here we used morphological assessment of taxa in zooplankton samples to develop a large barcode database ...

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