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Comparative genomics reveals insights into avian genome evolution and adaptation

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dc.contributor.author Zhang, Guojie en
dc.contributor.author Li, Cai en
dc.contributor.author Li, Qiye en
dc.contributor.author Li, Bo en
dc.contributor.author Larkin, Denis M. en
dc.contributor.author Lee, Chul en
dc.contributor.author Storz, Jay F. en
dc.contributor.author Antunes, Agostinho en
dc.contributor.author Greenwold, Matthew J. en
dc.contributor.author Meredith, Robert W. en
dc.contributor.author Ödeen, Anders en
dc.contributor.author Cui, Jie en
dc.contributor.author Zhou, Qi en
dc.contributor.author Xu, Luohao en
dc.contributor.author Pan, Hailin en
dc.contributor.author Wang, Zongji en
dc.contributor.author Jin, Lijun en
dc.contributor.author Zhang, Pei en
dc.contributor.author Hu, Haofu en
dc.contributor.author Yang, Wei en
dc.contributor.author Hu, Jiang en
dc.contributor.author Xiao, Jin en
dc.contributor.author Yang, Zhikai en
dc.contributor.author Liu, Yang en
dc.contributor.author Xie, Qiaolin en
dc.contributor.author Yu, Hao en
dc.contributor.author Lian, Jinmin en
dc.contributor.author Wen, Ping en
dc.contributor.author Zhang, Fang en
dc.contributor.author Li, Hui en
dc.contributor.author Zeng, Yongli en
dc.contributor.author Xiong, Zijun en
dc.contributor.author Liu, Shiping en
dc.contributor.author Zhou, Long en
dc.contributor.author Huang, Zhiyong en
dc.contributor.author An, Na en
dc.contributor.author Wang, Jie en
dc.contributor.author Zheng, Qiumei en
dc.contributor.author Xiong, Yingqi en
dc.contributor.author Wang, Guangbiao en
dc.contributor.author Wang, Bo en
dc.contributor.author Wang, Jingjing en
dc.contributor.author Fan, Yu en
dc.contributor.author Fonseca, Rute R. da en
dc.contributor.author Alfaro-Núñez, Alonzo en
dc.contributor.author Schubert, Mikkel en
dc.contributor.author Orlando, Ludovic en
dc.contributor.author Mourier, Tobias en
dc.contributor.author Howard, Jason T. en
dc.contributor.author Ganapathy, Ganeshkumar en
dc.contributor.author Pfenning, Andreas en
dc.contributor.author Whitney, Osceola en
dc.contributor.author Rivas, Miriam V. en
dc.contributor.author Hara, Erina en
dc.contributor.author Smith, Julia en
dc.contributor.author Farré, Marta en
dc.contributor.author Narayan, Jitendra en
dc.contributor.author Slavov, Gancho en
dc.contributor.author Romanov, Michael N. en
dc.contributor.author Borges, Rui en
dc.contributor.author Machado, João Paulo en
dc.contributor.author Khan, Imran en
dc.contributor.author Springer, Mark S. en
dc.contributor.author Gatesy, John en
dc.contributor.author Hoffmann, Federico G. en
dc.contributor.author Opazo, Juan C. en
dc.contributor.author Håstad, Olle en
dc.contributor.author Sawyer, Roger H. en
dc.contributor.author Kim, Heebal en
dc.contributor.author Kim, Kyu-Won en
dc.contributor.author Kim, Hyeon Jeong en
dc.contributor.author Cho, Seoae en
dc.contributor.author Li, Ning en
dc.contributor.author Huang, Yinhua en
dc.contributor.author Bruford, Michael W. en
dc.contributor.author Zhan, Xiangjiang en
dc.contributor.author Dixon, Andrew en
dc.contributor.author Bertelsen, Mads F. en
dc.contributor.author Derryberry, Elizabeth P. en
dc.contributor.author Warren, Wesley en
dc.contributor.author Wilson, Richard K. en
dc.contributor.author Li, Shengbin en
dc.contributor.author Ray, David A. en
dc.contributor.author Green, Richard E. en
dc.contributor.author O'Brien, Stephen J. en
dc.contributor.author Griffin, Darren en
dc.contributor.author Johnson, Warren E. en
dc.contributor.author Haussler, David en
dc.contributor.author Ryder, Oliver A. en
dc.contributor.author Willerslev, Eske en
dc.contributor.author Graves, Gary R. en
dc.contributor.author Alström, Per en
dc.contributor.author Fjeldså, Jon en
dc.contributor.author Mindell, David P. en
dc.contributor.author Edwards, Scott V. en
dc.contributor.author Braun, Edward L. en
dc.contributor.author Rahbek, Carsten en
dc.contributor.author Burt, David W. en
dc.contributor.author Houde, Peter en
dc.contributor.author Zhang, Yong en
dc.contributor.author Yang, Huanming en
dc.contributor.author Wang, Jian en
dc.contributor.author Jarvis, Erich D. en
dc.contributor.author Gilbert, M. T. en
dc.contributor.author Wang, Jun en
dc.contributor.author Ye, Chen en
dc.contributor.author Liang, Shaoguang en
dc.contributor.author Yan, Zengli en
dc.contributor.author Zepeda, M. L. en
dc.contributor.author Campos, Paula F. en
dc.contributor.author Velazquez, Amhed Missael Vargas en
dc.contributor.author Samaniego, José Alfredo en
dc.contributor.author Avila-Arcos, Mar en
dc.contributor.author Martin, Michael D. en
dc.contributor.author Barnett, Ross en
dc.contributor.author Ribeiro, Angela M. en
dc.contributor.author Mello, Claudio V. en
dc.contributor.author Lovell, Peter V. en
dc.contributor.author Almeida, Daniela en
dc.contributor.author Maldonado, Emanuel en
dc.contributor.author Pereira, Joana en
dc.contributor.author Sunagar, Kartik en
dc.contributor.author Philip, Siby en
dc.contributor.author Dominguez-Bello, Maria en
dc.contributor.author Bunce, Michael en
dc.contributor.author Lambert, David en
dc.contributor.author Brumfield, Robb T. en
dc.contributor.author Sheldon, Frederick H. en
dc.contributor.author Holmes, Edward C. en
dc.contributor.author Gardner, Paul P. en
dc.contributor.author Steeves, Tammy E. en
dc.contributor.author Stadler, Peter F. en
dc.contributor.author Burge, Sarah W. en
dc.contributor.author Lyons, Eric en
dc.contributor.author Smith, Jacqueline en
dc.contributor.author McCarthy, Fiona en
dc.contributor.author Pitel, Frederique en
dc.contributor.author Rhoads, Douglas en
dc.contributor.author Froman, David P. en
dc.date.accessioned 2015-04-20T15:15:47Z
dc.date.available 2015-04-20T15:15:47Z
dc.date.issued 2014
dc.identifier.citation Zhang, Guojie, Li, Cai, Li, Qiye, Li, Bo, Larkin, Denis M., Lee, Chul, Storz, Jay F., Antunes, Agostinho, Greenwold, Matthew J., Meredith, Robert W., Ödeen, Anders, Cui, Jie, Zhou, Qi, Xu, Luohao, Pan, Hailin, Wang, Zongji, Jin, Lijun, Zhang, Pei, Hu, Haofu, Yang, Wei, Hu, Jiang, Xiao, Jin, Yang, Zhikai, Liu, Yang, Xie, Qiaolin et al. 2014. "<a href="https%3A%2F%2Frepository.si.edu%2Fhandle%2F10088%2F25531">Comparative genomics reveals insights into avian genome evolution and adaptation</a>." <em>Science</em>. 346 (6215):1311&ndash;1320. <a href="https://doi.org/10.1126/science.1251385">https://doi.org/10.1126/science.1251385</a> en
dc.identifier.issn 0036-8075
dc.identifier.uri http://hdl.handle.net/10088/25531
dc.description.abstract Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. The avian genome is principally characterized by its constrained size, which predominantly arose because of lineage-specific erosion of repetitive elements, large segmental deletions, and gene loss. Avian genomes furthermore show a remarkably high degree of evolutionary stasis at the levels of nucleotide sequence, gene synteny, and chromosomal structure. Despite this pattern of conservation, we detected many non-neutral evolutionary changes in protein-coding genes and noncoding regions. These analyses reveal that pan-avian genomic diversity covaries with adaptations to different lifestyles and convergent evolution of traits. en
dc.relation.ispartof Science en
dc.title Comparative genomics reveals insights into avian genome evolution and adaptation en
dc.type Journal Article en
dc.identifier.srbnumber 133190
dc.identifier.doi 10.1126/science.1251385
rft.jtitle Science
rft.volume 346
rft.issue 6215
rft.spage 1311
rft.epage 1320
dc.description.SIUnit NH-Vertebrate Zoology en
dc.description.SIUnit NMNH en
dc.description.SIUnit NZP en
dc.description.SIUnit Peer-reviewed en
dc.citation.spage 1311
dc.citation.epage 1320


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