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Browsing NZP Staff Publications by Author "Campana, Michael G."

Browsing NZP Staff Publications by Author "Campana, Michael G."

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  • Adaptive Radiation Genomics of Two Ecologically Divergent Hawai'ian Honeycreepers: The 'akiapola'au and the Hawai'i 'amakihi 
    Campana, Michael G.; Corvelo, André; Shelton, Jennifer; Callicrate, Taylor E.; Bunting, Karen L.; Riley-Gillis, Bridget; Wos, Frank; DeGrazia, Justin; Jarvis, Erich D.; Fleischer, Robert C. (2020)
    The Hawai'ian honeycreepers (drepanids) are a classic example of adaptive radiation: they adapted to a variety of novel dietary niches, evolving a wide range of bill morphologies. Here we investigated genomic diversity, ...
  • As wild as they come: Study confirms that Przewalski's horses are the best of the rest 
    Leimgruber, Peter; Campana, Michael G.; Maldonado, Jesús E.; Harris, Tara R.; Dejid, Nandintsetseg; Cao, Qing; Songer, Melissa A. (2018)
  • Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf 
    Ferrari, Giada; Lischer, Heidi E. L.; Neukamm, Judith; Rayo, Enrique; Borel, Nicole; Pospischil, Andreas; Rühli, Frank; Bouwman, Abigail S.; Campana, Michael G. (2018)
    The reconstruction of ancient metagenomes from archaeological material, and their implication in human health and evolution, is one of the most recent advances in paleomicrobiological studies. However, as for all ancient ...
  • BaitsTools: software for hybridization capture bait design 
    Campana, Michael G. (2018)
    Nucleic acid hybridization capture is a principal technology in molecular ecology and genomics. Bait design, however, is a non-trivial task and few resources currently exist to automate the process. Here, I present BaitsTools, ...
  • Dense sampling of bird diversity increases power of comparative genomics 
    Feng, Shaohong; Stiller, Josefin; Deng, Yuan; Armstrong, Joel; Fang, Qi; Reeve, Andrew Hart; Xie, Duo; Chen, Guangji; Guo, Chunxue; Faircloth, Brant C.; Petersen, Bent; Wang, Zongji; Zhou, Qi; Diekhans, Mark; Chen, Wanjun; Andreu-Sánchez, Sergio; Margaryan, Ashot; Howard, Jason Travis; Parent, Carole; Pacheco, George; Sinding, Mikkel-Holger S.; Puetz, Lara; Cavill, Emily; Ribeiro, Ângela M.; Eckhart, Leopold; Fjeldså, Jon; Hosner, Peter A.; Brumfield, Robb T.; Christidis, Les; Bertelsen, Mads F.; Sicheritz-Ponten, Thomas; Tietze, Dieter Thomas; Robertson, Bruce C.; Song, Gang; Borgia, Gerald; Claramunt, Santiago; Lovette, Irby J.; Cowen, Saul J.; Njoroge, Peter; Dumbacher, John Philip; Ryder, Oliver A.; Fuchs, Jérôme; Bunce, Michael; Burt, David W.; Cracraft, Joel; Meng, Guanliang; Hackett, Shannon J.; Ryan, Peter G.; Jønsson, Knud Andreas; Jamieson, Ian G.; da Fonseca, Rute R.; Braun, Edward L.; Houde, Peter; Mirarab, Siavash; Suh, Alexander; Hansson, Bengt; Ponnikas, Suvi; Sigeman, Hanna; Stervander, Martin; Frandsen, Paul B.; van der Zwan, Henriette; van der Sluis, Rencia; Visser, Carina; Balakrishnan, Christopher N.; Clark, Andrew G.; Fitzpatrick, John W.; Bowman, Reed; Chen, Nancy; Cloutier, Alison; Sackton, Timothy B.; Edwards, Scott V.; Foote, Dustin J.; Shakya, Subir B.; Sheldon, Frederick H.; Vignal, Alain; Soares, André E. R.; Shapiro, Beth; González-Solís, Jacob; Ferrer-Obiol, Joan; Rozas, Julio; Riutort, Marta; Tigano, Anna; Friesen, Vicki; Dalén, Love; Urrutia, Araxi O.; Székely, Tamás; Liu, Yang; Campana, Michael G.; Corvelo, André; Fleischer, Robert C.; Rutherford, Kim M.; Gemmell, Neil J.; Dussex, Nicolas; Mouritsen, Henrik; Thiele, Nadine; Delmore, Kira; Liedvogel, Miriam; Franke, Andre; Hoeppner, Marc P.; Krone, Oliver; Fudickar, Adam M.; Milá, Borja; Ketterson, Ellen D.; Fidler, Andrew Eric; Friis, Guillermo; Parody-Merino, Ángela M.; Battley, Phil F.; Cox, Murray P.; Lima, Nicholas Costa Barroso; Prosdocimi, Francisco; Parchman, Thomas Lee; Schlinger, Barney A.; Loiselle, Bette A.; Blake, John G.; Lim, Haw Chuan; Day, Lainy B.; Fuxjager, Matthew J.; Baldwin, Maude W.; Braun, Michael J.; Wirthlin, Morgan; Dikow, Rebecca B.; Ryder, T. B.; Camenisch, Glauco; Keller, Lukas F.; DaCosta, Jeffrey M.; Hauber, Mark E.; Louder, Matthew I. M.; Witt, Christopher C.; McGuire, Jimmy A.; Mudge, Joann; Megna, Libby C.; Carling, Matthew D.; Wang, Biao; Taylor, Scott A.; Del-Rio, Glaucia; Aleixo, Alexandre; Vasconcelos, Ana Tereza Ribeiro; Mello, Claudio V.; Weir, Jason T.; Haussler, David; Li, Qiye; Yang, Huanming; Wang, Jian; Lei, Fumin; Rahbek, Carsten; Gilbert, M. T.; Graves, Gary R.; Jarvis, Erich D.; Paten, Benedict; Zhang, Guojie (2020)
    Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity1–4. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captures only a ...
  • Genetic structure and population history in two critically endangered Kaua'i honeycreepers 
    Cassin-Sackett, Loren; Campana, Michael G.; McInerney, Nancy Rotzel; Lim, Haw Chuan; Przelomska, Natalia A. S.; Masuda, Bryce; Chesser, R. Terry; Paxton, Eben H.; Foster, Jeffrey T.; Crampton, Lisa H.; Fleischer, Robert C. (2021)
    Population sizes of endemic songbirds on Kaua'i have decreased by an order of magnitude over the past 10-15 years to dangerously low numbers. The primary cause appears to be the ascent of invasive mosquitoes and ...
  • Interacting effects of wildlife loss and climate on ticks and tick-borne disease 
    Titcomb, Georgia; Allan, Brian F.; Ainsworth, Tyler; Henson, Lauren H.; Hedlund, Tyler; Pringle, Robert M.; Palmer, Todd M.; Njoroge, Laban; Campana, Michael G.; Fleischer, Robert C.; Mantas, John Naisikie; Young, Hillary S. (2017)
    Both large-wildlife loss and climatic changes can independently influence the prevalence and distribution of zoonotic disease. Given growing evidence that wildlife loss often has stronger community-level effects in ...
  • Little genetic structure in a Bornean endemic small mammal across a steep ecological gradient 
    Parker, Lillian D.; Hawkins, Melissa T. R.; Camacho-Sanchez, Miguel; Campana, Michael G.; West-Roberts, Jacob; Wilbert, Tammy R.; Lim, Haw Chuan; Rockwood, Larry L.; Leonard, Jennifer A.; Maldonado, Jesús E. (2020)
    Abstract Janzen?s influential ?mountain passes are higher in the tropics? hypothesis predicts restricted gene flow and genetic isolation among populations spanning elevational gradients in the tropics. Few studies have ...
  • Microbial Genomics of Ancient Plagues and Outbreaks 
    Andam, Cheryl P.; Worby, Colin J.; Chang, Qiuzhi; Campana, Michael G. (2016)
    The recent use of next-generation sequencing methods to investigate historical disease outbreaks has provided us with an unprecedented ability to address important and long-standing questions in epidemiology, pathogen ...
  • Parthenogenesis in a captive Asian water dragon (<I>Physignathus cocincinus</I>) identified with novel microsatellites 
    Miller, Kyle L.; Castañeda Rico, Susette; Muletz-Wolz, Carly; Campana, Michael G.; McInerney, Nancy; Augustine, Lauren; Frere, Celine; Peters, Alan M.; Fleischer, Robert C. (2019)
  • Population Genomics and Structure of the Critically Endangered Mariana Crow (<I>Corvus kubaryi</I>) 
    Cortes-Rodriguez, Nandadevi; Campana, Michael G.; Berry, Lainie; Faegre, Sarah; Derrickson, Scott R.; Ha, Renee Robinette; Dikow, Rebecca B.; Rutz, Christian; Fleischer, Robert C. (2019)
    The Mariana Crow, or &amp;Aring;ga (Corvus kubaryi), is a critically endangered species (IUCN -International Union for Conservation of Nature), endemic to the islands of Guam and Rota in the Mariana Archipelago. It is ...
  • Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico 
    Vågene, Åshild J.; Herbig, Alexander; Campana, Michael G.; Robles García, Nelly M.; Warinner, Christina; Sabin, Susanna; Spyrou, Maria A.; Andrades Valtueña, Aida; Huson, Daniel; Tuross, Noreen; Bos, Kirsten I.; Krause, Johannes (2018)
    Indigenous populations of the Americas experienced high mortality rates during the early contact period as a result of infectious diseases, many of which were introduced by Europeans. Most of the pathogenic agents that ...
  • Tick Burdens in a Small-Mammal Community in Virginia 
    Card, Leah R.; McShea, William J.; Fleischer, Robert C.; Maldonado, Jesús E.; Stewardson, Kristin; Campana, Michael G.; Jansen, Patrick A.; Calabrese, Justin M. (2019)
    Virginia has seen dramatic increases in reported cases of Lyme disease and Rocky Mountain spotted fever, but basic knowledge on the community ecology of these tick-borne diseases is poor. We examined the tick burdens of 5 ...
  • Transcriptome assembly and differential gene expression of the invasive avian malaria parasite Plasmodium relictum in HawaiModified Letter Turned Commai 
    Videvall, Elin; Paxton, Kristina L.; Campana, Michael G.; Cassin-Sackett, Loren; Atkinson, Carter T.; Fleischer, Robert C. (2021)
    The malaria parasite Plasmodium relictum (lineage GRW4) was introduced less than a century ago to the native avifauna of HawaiModified Letter Turned Commai, where it has since caused major declines of endemic bird populations. ...

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