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Browsing by Author "Chakrabarty, Prosanta"

Browsing by Author "Chakrabarty, Prosanta"

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  • Biological evidence supports an early and complex emergence of the Isthmus of Panama 
    Bacon, Christine D.; Silvestro, Daniele; Jaramillo, Carlos A.; Smith, Brian Tilston; Chakrabarty, Prosanta; Antonelli, Alexandre (2015)
    The linking of North and South America by the Isthmus of Panama had major impacts on global climate, oceanic and atmospheric currents, and biodiversity, yet the timing of this critical event remains contentious. The Isthmus ...
  • Complete mitochondrial genomes of three Neotropical sleeper gobies: Eleotris amblyopsis, E. picta and Hemieleotris latifasciata (Gobiiformes: Eleotridae) 
    Alda, Fernando; Adams, Alexandria J.; McMillan, W. Owen; Chakrabarty, Prosanta (2017)
    We report the first complete mitochondrial genomes of three species of eleotrid fishes from the Pacific and Atlantic watersheds of Panama: Eleotris amblyopsis, E. picta, and Hemieleotris latifasciata. The three species ...
  • Genomic, ecological, and morphological approaches to investigating species limits: A case study in modern taxonomy from Tropical Eastern Pacific surgeonfishes 
    Ludt, William B.; Bernal, Moisés A.; Kenworthy, Erica; Salas, Eva; Chakrabarty, Prosanta (2019)
    A wide variety of species are distinguished by slight color variations. However, molecular analyses have repeatedly demonstrated that coloration does not always correspond to distinct evolutionary histories between closely ...
  • GenSeq: An updated nomenclature and ranking for genetic sequences from type and non-type sources 
    Chakrabarty, Prosanta; Warren, Melanie; Page, Lawrence; Baldwin, Carole C. (2013)
  • Mitogenomic divergence between three pairs of putative geminate fishes from Panama 
    Alda, Fernando; Adams, Alexandria J.; Chakrabarty, Prosanta; McMillan, W. O. (2018)
    We sequenced the complete mitochondrial genomes of three pairs of congeneric peripheral fishes distributed on either side of the Isthmus of Panama in order to test their status as geminate species pairs. Our phylogenetic ...
  • A New Era of Morphological Investigations: Reviewing Methods for Comparative Anatomical Studies 
    Ford, K. L.; Albert, J. S.; Summers, A. P.; Hedrick, B. P.; Schachner, E. R.; Jones, A. S.; Evans, K.; Chakrabarty, Prosanta (2023)
    Synopsis The increased use of imaging technology in biological research has drastically altered morphological studies in recent decades and allowed for the preservation of important collection specimens alongside detailed ...
  • Reply to Lessios and Marko et al.: Early and progressive migration across the Isthmus of Panama is robust to missing data and biases 
    Bacon, Christine D.; Silvestro, Daniele; Jaramillo, Carlos A.; Smith, Brian Tilston; Chakrabarty, Prosanta; Antonelli, Alexandre (2015)
  • SCIENCE FORUM The critical importance of vouchers in genomics 
    Buckner, Janet C.; Sanders, Robert C.; Faircloth, Brant C.; Chakrabarty, Prosanta (2021)
    A voucher is a permanently preserved specimen that is maintained in an accessible collection. In genomics, vouchers serve as the physical evidence for the taxonomic identification of genome assemblies. Unfortunately, the ...
  • Specimen collection is essential for modern science 
    Nachman, Michael W.; Beckman, Elizabeth J.; Bowie, Rauri Ck; Cicero, Carla; Conroy, Chris J.; Dudley, Robert; Hayes, Tyrone B.; Koo, Michelle S.; Lacey, Eileen A.; Martin, Christopher H.; McGuire, Jimmy A.; Patton, James L.; Spencer, Carol L.; Tarvin, Rebecca D.; Wake, Marvalee H.; Wang, Ian J.; Achmadi, Anang; Álvarez-Castañeda, Sergio Ticul; Andersen, Michael J.; Arroyave, Jairo; Austin, Christopher C.; Barker, F. K.; Barrow, Lisa N.; Barrowclough, George F.; Bates, John; Bauer, Aaron M.; Bell, Kayce C.; Bell, Rayna C.; Bronson, Allison W.; Brown, Rafe M.; Burbrink, Frank T.; Burns, Kevin J.; Cadena, Carlos Daniel; Cannatella, David C.; Castoe, Todd A.; Chakrabarty, Prosanta; Colella, Jocelyn P.; Cook, Joseph A.; Cracraft, Joel L.; Davis, Drew R.; Davis Rabosky, Alison R.; D’Elía, Guillermo; Dumbacher, John P.; Dunnum, Jonathan L.; Edwards, Scott V.; Esselstyn, Jacob A.; Faivovich, Julián; Fjeldså, Jon; Flores-Villela, Oscar; Ford, Kassandra; Fuchs, Jérôme; Fujita, Matthew K.; Good, Jeffrey M.; Greenbaum, Eli; Greene, Harry W.; Hackett, Shannon; Hamidy, Amir; Hanken, James; Haryoko, Tri; Hawkins, Melissa Tr; Heaney, Lawrence R.; Hillis, David M.; Hollingsworth, Bradford D.; Hornsby, Angela D.; Hosner, Peter A.; Irham, Mohammad; Jansa, Sharon; Jiménez, Rosa Alicia; Joseph, Leo; Kirchman, Jeremy J.; LaDuc, Travis J.; Leaché, Adam D.; Lessa, Enrique P.; López-Fernández, Hernán; Mason, Nicholas A.; McCormack, John E.; McMahan, Caleb D.; Moyle, Robert G.; Ojeda, Ricardo A.; Olson, Link E.; Kin Onn, Chan; Parenti, Lynne R.; Parra-Olea, Gabriela; Patterson, Bruce D.; Pauly, Gregory B.; Pavan, Silvia E.; Peterson, A. T.; Poe, Steven; Rabosky, Daniel L.; Raxworthy, Christopher J.; Reddy, Sushma; Rico-Guevara, Alejandro; Riyanto, Awal; Rocha, Luiz A.; Ron, Santiago R.; Rovito, Sean M.; Rowe, Kevin C.; Rowley, Jodi; Ruane, Sara; Salazar-Valenzuela, David; Shultz, Allison J.; Sidlauskas, Brian; Sikes, Derek S.; Simmons, Nancy B.; Stiassny, Melanie L. J.; Streicher, Jeffrey W.; Stuart, Bryan L.; Summers, Adam P.; Tavera, Jose; Teta, Pablo; Thompson, Cody W.; Timm, Robert M.; Torres-Carvajal, Omar; Voelker, Gary; Voss, Robert S.; Winker, Kevin; Witt, Christopher; Wommack, Elizabeth A.; Zink, Robert M. (2023)
  • A taxonomic revision of Cheilodactylidae and Latridae (Centrarchiformes: Cirrhitoidei) using morphological and genomic characters 
    Ludt, William B.; Burridge, Christopher P.; Chakrabarty, Prosanta (2019)
    Systematic relationships within the Cirrhitoidei, a suborder of five closely related families, have been uncertain for over a century. This is particularly true in reference to the families Cheilodactylidae and Latridae, ...

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