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Browsing by Author "Farré, Marta"

Browsing by Author "Farré, Marta"

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  • Comparative genomics reveals insights into avian genome evolution and adaptation 
    Zhang, Guojie; Li, Cai; Li, Qiye; Li, Bo; Larkin, Denis M.; Lee, Chul; Storz, Jay F.; Antunes, Agostinho; Greenwold, Matthew J.; Meredith, Robert W.; Ödeen, Anders; Cui, Jie; Zhou, Qi; Xu, Luohao; Pan, Hailin; Wang, Zongji; Jin, Lijun; Zhang, Pei; Hu, Haofu; Yang, Wei; Hu, Jiang; Xiao, Jin; Yang, Zhikai; Liu, Yang; Xie, Qiaolin; Yu, Hao; Lian, Jinmin; Wen, Ping; Zhang, Fang; Li, Hui; Zeng, Yongli; Xiong, Zijun; Liu, Shiping; Zhou, Long; Huang, Zhiyong; An, Na; Wang, Jie; Zheng, Qiumei; Xiong, Yingqi; Wang, Guangbiao; Wang, Bo; Wang, Jingjing; Fan, Yu; Fonseca, Rute R. da; Alfaro-Núñez, Alonzo; Schubert, Mikkel; Orlando, Ludovic; Mourier, Tobias; Howard, Jason T.; Ganapathy, Ganeshkumar; Pfenning, Andreas; Whitney, Osceola; Rivas, Miriam V.; Hara, Erina; Smith, Julia; Farré, Marta; Narayan, Jitendra; Slavov, Gancho; Romanov, Michael N.; Borges, Rui; Machado, João Paulo; Khan, Imran; Springer, Mark S.; Gatesy, John; Hoffmann, Federico G.; Opazo, Juan C.; Håstad, Olle; Sawyer, Roger H.; Kim, Heebal; Kim, Kyu-Won; Kim, Hyeon Jeong; Cho, Seoae; Li, Ning; Huang, Yinhua; Bruford, Michael W.; Zhan, Xiangjiang; Dixon, Andrew; Bertelsen, Mads F.; Derryberry, Elizabeth P.; Warren, Wesley; Wilson, Richard K.; Li, Shengbin; Ray, David A.; Green, Richard E.; O'Brien, Stephen J.; Griffin, Darren; Johnson, Warren E.; Haussler, David; Ryder, Oliver A.; Willerslev, Eske; Graves, Gary R.; Alström, Per; Fjeldså, Jon; Mindell, David P.; Edwards, Scott V.; Braun, Edward L.; Rahbek, Carsten; Burt, David W.; Houde, Peter; Zhang, Yong; Yang, Huanming; Wang, Jian; Jarvis, Erich D.; Gilbert, M. T.; Wang, Jun; Ye, Chen; Liang, Shaoguang; Yan, Zengli; Zepeda, M. L.; Campos, Paula F.; Velazquez, Amhed Missael Vargas; Samaniego, José Alfredo; Avila-Arcos, Mar; Martin, Michael D.; Barnett, Ross; Ribeiro, Angela M.; Mello, Claudio V.; Lovell, Peter V.; Almeida, Daniela; Maldonado, Emanuel; Pereira, Joana; Sunagar, Kartik; Philip, Siby; Dominguez-Bello, Maria; Bunce, Michael; Lambert, David; Brumfield, Robb T.; Sheldon, Frederick H.; Holmes, Edward C.; Gardner, Paul P.; Steeves, Tammy E.; Stadler, Peter F.; Burge, Sarah W.; Lyons, Eric; Smith, Jacqueline; McCarthy, Fiona; Pitel, Frederique; Rhoads, Douglas; Froman, David P. (2014)
    Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant ...
  • Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks 
    Farré, Marta; Kim, Jaebum; Proskuryakova, Anastasia A.; Zhang, Yang; Kulemzina, Anastasia I.; Li, Qiye; Zhou, Yang; Xiong, Yingqi; Johnson, Jennifer L.; Perelman, Polina; Johnson, Warren E.; Warren, Wesley C.; Kukekova, Anna V.; Zhang, Guojie; O'Brien, Stephen J.; Ryder, Oliver A.; Graphodatsky, Alexander S.; Ma, Jian; Lewin, Harris A.; Larkin, Denis M. (2019)
    The role of chromosome rearrangements in driving evolution has been a long-standing question of evolutionary biology. Here we focused on ruminants as a model to assess how rearrangements may have contributed to the evolution ...
  • Evolution of the ancestral mammalian karyotype and syntenic regions 
    Damas, Joana; Corbo, Marco; Kim, Jaebum; Turner-Maier, Jason; Farré, Marta; Larkin, Denis M.; Ryder, Oliver A.; Steiner, Cynthia; Houck, Marlys L.; Hall, Shaune; Shiue, Lily; Thomas, Stephen; Swale, Thomas; Daly, Mark; Korlach, Jonas; Uliano-Silva, Marcela; Mazzoni, Camila J.; Birren, Bruce W.; Genereux, Diane P.; Johnson, Jeremy; Lindblad-Toh, Kerstin; Karlsson, Elinor K.; Nweeia, Martin T.; Johnson, Rebecca N.; Consortium, Zoonomia; Lewin, Harris A.; Andrews, Gregory; Armstrong, Joel C.; Bianchi, Matteo; Birren, Bruce W.; Bredemeyer, Kevin R.; Breit, Ana M.; Christmas, Matthew J.; Clawson, Hiram; Damas, Joana; Palma, Federica Di; Diekhans, Mark; Dong, Michael X.; Eizirik, Eduardo; Fan, Kaili; Fanter, Cornelia; Foley, Nicole M.; Forsberg-Nilsson, Karin; Garcia, Carlos J.; Gatesy, John; Gazal, Steven; Genereux, Diane P.; Goodman, Linda; Grimshaw, Jenna; Halsey, Michaela K.; Harris, Andrew J.; Hickey, Glenn; Hiller, Michael; Hindle, Allyson G.; Hubley, Robert M.; Hughes, Graham M.; Johnson, Jeremy; Juan, David; Kaplow, Irene M.; Karlsson, Elinor K.; Keough, Kathleen C.; Kirilenko, Bogdan; Koepfli, Klaus-Peter; Korstian, Jennifer M.; Kowalczyk, Amanda; Kozyrev, Sergey V.; Lawler, Alyssa J.; Lawless, Colleen; Lehmann, Thomas; Levesque, Danielle L.; Lewin, Harris A.; Li, Xue; Lind, Abigail; Lindblad-Toh, Kerstin; Mackay-Smith, Ava; Marinescu, Voichita D.; Marques-Bonet, Tomas; Mason, Victor C.; Meadows, Jennifer R. S.; Meyer, Wynn K.; Moore, Jill E.; Moreira, Lucas R.; Moreno-Santillan, Diana; Morrill, Kathleen M.; Muntané, Gerard; Murphy, William J.; Navarro, Arcadi; Nweeia, Martin; Ortmann, Sylvia; Osmanski, Austin; Paten, Benedict; Paulat, Nicole S.; Pfenning, Andreas R.; Phan, BaDoi N.; Pollard, Katherine S.; Pratt, Henry E.; Ray, David A.; Reilly, Steven K.; Rosen, Jeb R.; Ruf, Irina; Ryan, Louise; Ryder, Oliver A.; Sabeti, Pardis C.; Schäffer, Daniel E.; Serres, Aitor; Shapiro, Beth; Smit, Arian F. A.; Springer, Mark; Srinivasan, Chaitanya; Steiner, Cynthia; Storer, Jessica M.; Sullivan, Kevin A. M.; Sullivan, Patrick F.; Sundström, Elisabeth; Supple, Megan A.; Swofford, Ross; Talbot, Joy-El; Teeling, Emma; Turner-Maier, Jason; Valenzuela, Alejandro; Wagner, Franziska; Wallerman, Ola; Wang, Chao; Wang, Juehan; Weng, Zhiping; Wilder, Aryn P.; Wirthlin, Morgan E.; Xue, James R.; Zhang, Xiaomeng (2022)
    Decrypting the rearrangements that drive mammalian chromosome evolution is critical to understanding the molecular bases of speciation, adaptation, and disease susceptibility. Using 8 scaffolded and 26 chromosome-scale ...

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