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Browsing by Author "Ratan, Aakrosh"

Browsing by Author "Ratan, Aakrosh"

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  • Comparative and population mitogenomic analyses of Madagascar's extinct, giant 'subfossil' lemurs 
    Kistler, Logan J.; Ratan, Aakrosh; Godfrey, Laurie R.; Crowley, Brooke E.; Hughes, Cris E.; Lei, Runhua; Cui, Yinqiu; Wood, Mindy L.; Muldoon, Kathleen M.; Andriamialison, Haingoson; McGraw, John J.; Tomsho, Lynn P.; Schuster, Stephan C.; Miller, Webb; Louis, Edward E.; Yoder, Anne D.; Malhi, Ripan S.; Perry, George H. (2015)
  • Genetic diversity and population structure of the endangered marsupial <I>Sarcophilus harrisii </I>(Tasmanian devil) 
    Miller, Webb; Hayes, Vanessa M.; Ratan, Aakrosh; Petersen, Desiree C.; Wittekindt, Nicola E.; Miller, Jason; Walenz, Brian; Knight, James; Qi, Ji; Zhao, Fangqing; Wang, Qingyu; Bedoya-Reina, Oscar C.; Katiyar, Neerja; Tomsho, Lynn P.; McClellan Kasson, Lindsay; Hardie, Rae-Anne; Woodbridge, Paula; Tindall, Elizabeth A.; Bertelsen, Mads Frost; Dixon, Dale; Pyecroft, Stephen; Helgen, Kristofer M.; Lesk, Arthur M.; Pringle, Thomas H.; Patterson, Nick; Zhang, Yu; Kreiss, Alexandre; Woods, Gregory M.; Jones, Menna E.; Schuster, Stephan C. (2011)
    The Tasmanian devil (Sarcophilus harrisii) is threatened with extinction because of a contagious cancer known as Devil Facial Tumor Disease. The inability to mount an immune response and to reject these tumors might be ...
  • A massively parallel strategy for STR marker development, capture, and genotyping 
    Kistler, Logan J.; Johnson, Stephen M.; Irwin, Mitchell T.; Louis, Edward E.; Ratan, Aakrosh; Perry, George H. (2017)
    Short tandem repeat (STR) variants are highly polymorphic markers that facilitate powerful population genetic analyses. STRs are especially valuable in conservation and ecological genetic research, yielding detailed ...
  • The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus) 
    Miller, Webb; Drautz, Daniela I.; Janecka, Jan E.; Lesk, Arthur M.; Ratan, Aakrosh; Tomsho, Lynn P.; Packard, Mike; Zhang, Yeting; McClellan, Lindsay R.; Qi, Ji; Zhao, Fangqing; Gilbert, M. Thomas P.; Dalen, Love; Arsuaga, Juan Luis; Ericson, Per G. P.; Huson, Daniel H.; Helgen, Kristofer M.; Murphy, William J.; Gotherstrom, Anders; Schuster, Stephan C. (2009)
    We report the first two complete mitochondrial genome sequences of the thylacine (Thylacinus cynocephalus), or so-called Tasmanian tiger, extinct since 1936. The thylacine&#39;s phylogenetic position within australidelphian ...
  • SONiCS: PCR stutter noise correction in genome-scale microsatellites 
    Kedzierska, Katarzyna Z.; Gerber, Livia; Cagnazzi, Daniele; Krützen, Michael; Ratan, Aakrosh; Kistler, Logan; Berger, Bonnie (2018)
    AbstractMotivation. Massively parallel capture of short tandem repeats (STRs, or microsatellites) provides a strategy for population genomic and demographic an

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