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Browsing by Author "Pirro, Stacy"

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Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa)

Ohdera, Aki; Ames, Cheryl L.; Dikow, Rebecca B.; Kayal, Ehsan; Chiodin, Marta; Busby, Ben; La, Sean; Pirro, Stacy; Collins, Allen G.; Medina, Mónica; Ryan, Joseph F. (2019)

BACKGROUND: Anthozoa, Endocnidozoa, and Medusozoa are the 3 major clades of Cnidaria. Medusozoa is further divided into 4 clades, Hydrozoa, Staurozoa, Cubozoa, and Scyphozoa-the latter 3 lineages make up the clade Acraspeda. ...
The Complete Genome Sequences of 18 Species of Gadiformes (Actinopterygii, Chordata)

Roa-Varon, Adela; Pirro, Stacy (2022)

We present the complete genome sequences of 18 species of Gadiformes from 9 genera. Illumina sequencing was performed on genetic material from single wild-caught individuals. The reads were assembled using a de novo method ...
Describing biodiversity in the genomics era: A new species of Nearctic Cynipidae gall wasp and its genome

Brandao-Dias, Pedro F. P.; Zhang, Yuanmeng Miles; Pirro, Stacy; Vinson, Camila C.; Weinersmith, Kelly L.; Ward, Anna K. G.; Forbes, Andrew A.; Egan, Scott P. (2022)

Gall wasps (Hymenoptera: Cynipidae) specializing on live oaks in the genus Quercus (subsection Virentes) are a relatively diverse and well-studied community with 14 species described to date, albeit with incomplete information ...
A description of a novel swimming behavior in a dioecious population of Craspedacusta sowerbii, the rediscovery of the elusive Astrohydra japonica and the first genetic analysis of freshwater jellyfish in Japan

Peterson, Miles, I.; Tan, Kei Chloe; Collins, Allen; Kitano, Satoshi; Kusuoka, Yasushi; Suzuki, Takahito G.; Migita, Masao; Iesa, Iffah; Pirro, Stacy; Lindsay, Dhugal; Ames, Cheryl Lewis (2022)

Freshwater jellyfish comprising the genus Craspedacusta are thought to have originated in the Yangtze River, China and have since spread to all continents except Antarctica. In this study, jellyfish were collected from ...
Evolution of Linear Mitochondrial Genomes in Medusozoan Cnidarians

Kayal, Ehsan; Bentlage, Bastian; Collins, Allen Gilbert; Kayal, Mohsen; Pirro, Stacy; Lavrov, Dennis V. (2012)

In nearly all animals, mitochondrial DNA (mtDNA) consists of a single circular molecule that encodes several subunits of the protein complexes involved in oxidative phosphorylation as well as part of the machinery for their ...
First Complete Mitochondrial Genome Sequence from a Box Jellyfish Reveals a Highly Fragmented Linear Architecture and Insights into Telomere Evolution

Smith, David Roy; Kayal, Ehsan; Yanagihara, Angel A.; Collins, Allen Gilbert; Pirro, Stacy; Keeling, Patrick J. (2012)

Animal mitochondrial DNAs (mtDNAs) are typically single circular chromosomes, with the exception of those from medusozoan cnidarians (jellyfish and hydroids), which are linear and sometimes fragmented. Most medusozoans ...
Insights into the genome of the ‘Loco’ Concholepas concholepas (Gastropoda: Muricidae) from low-coverage short-read sequencing: genome size, ploidy, transposable elements, nuclear RNA gene operon, mitochondrial genome, and phylogenetic placement in the family Muricidae

Baeza, J. A.; González, M. Teresa; Sigwart, Julia D.; Greve, Carola; Pirro, Stacy (2024)

Background The Peruvian ‘chanque’ or Chilean ‘loco’ Concholepas concholepas is an economically, ecologically, and culturally important muricid gastropod heavily exploited by artisanal fisheries in the temperate southeastern ...
Insights into the nuclear and mitochondrial genome of the Lemon shark Negaprion brevirostris using low-coverage sequencing: Genome size, repetitive elements, mitochondrial genome, and phylogenetic placement

Baeza, J. A.; Stephens, Natalie C.; Baker, Alyssa; Lyons, Andrew; Franks, Bryan; Pirro, Stacy; Feldheim, Kevin A. (2024)
Phylogenomics of Bony-Tongue Fishes (Osteoglossomorpha) Shed Light on the Craniofacial Evolution and Biogeography of the Weakly Electric Clade (Mormyridae)

Peterson, Rose D.; Sullivan, John P.; Hopkins, Carl D.; Santaquiteria, Aintzane; Dillman, Casey B.; Pirro, Stacy; Betancur-R, Ricardo; Arcila, Dahiana; Hughes, Lily C.; Ortí, Guillermo (2022)

Abstract Bonytongues (Osteoglossomorpha) constitute an ancient clade of teleost fishes distributed in freshwater habitats throughout the world. The group includes well-known species such as arowanas, featherbacks, pirarucus, ...

Browsing by Author "Pirro, Stacy"

Browsing by Author "Pirro, Stacy"

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