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Browsing by Author "Papa, Riccardo"

Browsing by Author "Papa, Riccardo"

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  • Ogilvie, James G.; Van Belleghem, Steven; Range, Ryan; Papa, Riccardo; McMillan, W. O.; Chouteau, Mathieu; Counterman, Brian A. (2021)
  • Dasmahapatra, Kanchon K.; Walters, James R.; Briscoe, Adriana D.; Davey, John W.; Whibley, Annabel; Nadeau, Nicola J.; Zimin, Aleksey V.; Hughes, Daniel S. T.; Ferguson, Laura C.; Martin, Simon H.; Salazar, Camilo; Lewis, James J.; Adler, Sebastian; Ahn, Seung-Joon; Baker, Dean A.; Baxter, Simon W.; Chamberlain, Nicola L.; Chauhan, Ritika; Counterman, Brian A.; Dalmay, Tamas; Gilbert, Lawrence E.; Gordon, Karl; Heckel, David G.; Hines, Heather M.; Hoff, Katharina J.; Holland, Peter W. H.; Jacquin-Joly, Emmanuelle; Jiggins, Francis M.; Jones, Robert T.; Kapan, Durrell D.; Kersey, Paul; Lamas, Gerardo; Lawson, Daniel; Mapleson, Daniel; Maroja, Luana S.; Martin, Arnaud; Moxon, Simon; Palmer, William J.; Papa, Riccardo; Papanicolaou, Alexie; Pauchet, Yannick; Ray, David A.; Rosser, Neil; Salzberg, Steven L.; Supple, Megan A.; Surridge, Alison; Tenger-Trolander, Ayse; Vogel, Heiko; Wilkinson, Paul A.; Wilson, Derek; Yorke, James A.; Yuan, Furong; Balmuth, Alexi L.; Eland, Cathlene; Gharbi, Karim; Thomson, Marian; Gibbs, Richard A.; Han, Yi; Jayaseelan, Joy C.; Kovar, Christie; Mathew, Tittu; Muzny, Donna M.; Ongeri, Fiona; Pu, Ling-Ling; Qu, Jiaxin; Thornton, Rebecca L.; Worley, Kim C.; Wu, Yuan-Qing; Linares, Mauricio; Blaxter, Mark L.; Ffrench-Constant, Richard H.; Joron, Mathieu; Kronforst, Marcus R.; Mullen, Sean P.; Reed, Robert D.; Scherer, Steven E.; Richards, Stephen; Mallet, James; McMillan, William Owen; Jiggins, Chris D. (2012)
    The evolutionary importance of hybridization and introgression has long been debated(1). Hybrids are usually rare and unfit, but even infrequent hybridization can aid adaptation by transferring beneficial traits between ...
  • Zhang, Wei; Leon-Ricardo, Brian; van Schooten, Bas; Van Belleghem, Steven M.; Counterman, Brian A.; McMillan, W. O.; Kronforst, Marcus R.; Papa, Riccardo (2019)
    Butterfly eyes are complex organs that are composed of a diversity of proteins and they play a central role in visual signaling and ultimately, speciation and adaptation. Here, we utilized the whole eye transcriptome to ...
  • Van Belleghem, Steven M.; Rastas, Pasi; Papanicolaou, Alexie; Martin, Simon H.; Arias, Carlos F.; Supple, Megan A.; Hanly, Joseph J.; Mallet, James; Lewis, James J.; Hines, Heather M.; Ruiz, Mayte; Salazar, Camilo; Linares, Mauricio; Moreira, Gilson R. P.; Jiggins, Chris D.; Counterman, Brian A.; McMillan, W. O.; Papa, Riccardo (2017)
    Identifying the genomic changes that control morphological variation and understanding how they generate diversity is a major goal of evolutionary biology. In Heliconius butterflies, a small number of genes control the ...
  • van Schooten, Bas; Godoy-Vitorino, Filipa; McMillan, W. Owen; Papa, Riccardo (2018)
    Background: Insects are the most diverse group of animals which have established intricate evolutionary interactions with bacteria. However, the importance of these interactions is still poorly understood. Few studies have ...
  • Joron, Mathieu; Papa, Riccardo; Beltran, Margarita; Chamberlain, Nicola; Mavarez, Jesus; Baxter, Simon W.; Abanto, Moises; Bermingham, Eldredge; Humphray, Sean J.; Rogers, Jane; Beasley, Helen; Barlow, Karen; ffrench-Constant, Ricard H.; Mallet, James; McMillan, William Owen; Jiggins, Chris D. (2006)
  • van Schooten, Bas; Meléndez-Rosa, Jesyka; Van Belleghem, Steven M.; Jiggins, Chris D.; Tan, John D.; McMillan, W. Owen; Papa, Riccardo (2020)
    Chemosensory communication is essential to insect biology, play-ing indispensable roles during mate-finding, foraging, and ovipo-sition behaviors. These traits are particularly important during speciation, where chemical ...
  • Supple, Megan A.; Papa, Riccardo; Hines, Heather M.; McMillan, W. O.; Counterman, Brian A. (2015)
    A key to understanding the origins of species is determining the evolutionary processes that drive the patterns of genomic divergence during speciation. New genomic technologies enable the study of high-resolution genomic ...
  • Martin, Arnaud; Papa, Riccardo; Nadeau, Nicola J.; Hill, Ryan I.; Counterman, Brian A.; Halder, Georg; Jiggins, Chris D.; Kronforst, Marcus R.; Long, Anthony D.; McMillan, William Owen; Reed, Robert D. (2012)
    Although animals display a rich variety of shapes and patterns, the genetic changes that explain how complex forms arise are still unclear. Here we take advantage of the extensive diversity of Heliconius butterflies to ...
  • Cicconardi, Francesco; Milanetti, Edoardo; de Castro, Erika C. Pinheiro; Mazo-Vargas, Anyi; van Belleghem, Steven M.; Ruggieri, Angelo Alberto; Rastas, Pasi; Hanly, Joseph; Evans, Elizabeth; Jiggins, Chris D.; McMillan, W. Owen; Papa, Riccardo; di Marino, Daniele; Martin, Arnaud; Montgomery, Stephen H. (2023)
    Heliconius butterflies, a speciose genus of Mullerian mimics, represent a classic example of an adaptive radiation that includes a range of derived dietary, life history, physiological and neural traits. However, key ...
  • Hanly, Joseph J.; Loh, Ling S.; Mazo-Vargas, Anyi; Rivera-Miranda, Teomie S.; Livraghi, Luca; Tendolkar, Amruta; Day, Christopher R.; Liutikaite, Neringa; Earls, Emily A.; Corning, Olaf B. W. H.; D'Souza, Natalie; Hermina-Perez, José J.; Mehta, Caroline; Ainsworth, Julia A.; Rossi, Matteo; Papa, Riccardo; McMillan, W. Owen; Perry, Michael W.; Martin, Arnaud (2023)
    Butterfly color patterns provide visible and biodiverse phenotypic readouts of the patterning processes. Although the secreted ligand WntA has been shown to instruct the color pattern formation in butterflies, its mode of ...
  • Edelman, Nathaniel B.; Frandsen, Paul B.; Miyagi, Michael; Clavijo, Bernardo; Davey, John; Dikow, Rebecca B.; Garcia-Accinelli, Gonzalo; Van Belleghem, Steven M.; Patterson, Nick; Neafsey, Daniel E.; Challis, Richard; Kumar, Sujai; Moreira, Gilson R. P.; Salazar, Camilo; Chouteau, Mathieu; Counterman, Brian A.; Papa, Riccardo; Blaxter, Mark; Reed, Robert D.; Dasmahapatra, Kanchon K.; Kronforst, Marcus; Joron, Mathieu; Jiggins, Chris D.; McMillan, W. Owen; Di Palma, Federica; Blumberg, Andrew J.; Wakeley, John; Jaffe, David; Mallet, James (2019)
    We used 20 de novo genome assemblies to probe the speciation history and architecture of gene flow in rapidly radiating Heliconius butterflies. Our tests to distinguish incomplete lineage sorting from introgression indicate ...
  • Edelman, Nathaniel B.; Frandsen, Paul B.; Miyagi, Michael; Clavijo, Bernardo; Davey, John; Dikow, Rebecca; García-Accinelli, Gonzalo; van Belleghem, Steven; Patterson, Nick; Neafsey, Daniel E.; Challis, Richard; Kumar, Sujai; Moreira, Gilson; Salazar, Camilo; Chouteau, Mathieu; Counterman, Brian; Papa, Riccardo; Blaxter, Mark; Reed, Robert D.; Dasmahapatra, Kanchon; Kronforst, Marcus; Joron, Mathieu; Jiggins, Chris D.; McMillan, W. O.; Di Palma, Federica; Blumberg, Andrew J.; Wakeley, John; Jaffe, David; Mallet, James (Evolutionary Biology, 2018)
    We here pioneer a low-cost assembly strategy for 20 Heliconiini genomes to characterize the evolutionary history of the rapidly radiating genus Heliconius . A bifurcating tree provides a poor fit to the data, and we therefore ...
  • Supple, Megan; Papa, Riccardo; Counterman, Brian A.; McMillan, William Owen (Springer Netherlands, 2014)
  • Van Belleghem, Steven M.; Ruggieri, Angelo A.; Concha, Carolina; Livraghi, Luca; Hebberecht, Laura; Rivera, Edgardo Santiago; Ogilvie, James G.; Hanly, Joseph J.; Warren, Ian A.; Planas, Silvia; Ortiz-Ruiz, Yadira; Reed, Robert; Lewis, James J.; Jiggins, Chris D.; Counterman, Brian A.; McMillan, W. O.; Papa, Riccardo (2023)
    Little is known about the extent to which species use homologous regulatory architectures to achieve phenotypic convergence. By characterizing chromatin accessibility and gene expression in developing wing tissues, we ...
  • Livraghi, Luca; Hanly, Joseph J.; Van Bellghem, Steven M.; Montejo-Kovacevich, Gabriela; van Der Heijden, Eva S.M.; Loh, Ling Sheng; Ren, Anna; Warren, Ian A.; Lewis, James J.; Concha, Carolina; Hebberecht, Laura; Wright, Charlotte J.; Walker, Jonah M.; Foley, Jessica; Goldberg, Zachary H.; Arenas-Castro, Henry; Salazar, Camilo; Perry, Michael W.; Papa, Riccardo; Martin, Arnaud; McMillan, W. Owen; Jiggins, Chris D. (2021)
    In Heliconius butterflies, wing colour pattern diversity and scale types are controlled by a few genes of large effect that regulate colour pattern switches between morphs and species across a large mimetic radiation. One ...
  • Concha, Carolina; Wallbank, Richard W. R.; Hanly, Joseph J.; Fenner, Jennifer; Livraghi, Luca; Rivera, Edgardo Santiago; Paulo, Daniel F.; Arias, Carlos; Vargas, Marta; Sanjeev, Manu; Morrison, Colin; Tian, David; Aguirre, Paola; Ferrara, Sabrina; Foley, Jessica; Pardo-Diaz, Carolina; Salazar, Camilo; Linares, Mauricio; Massardo, Darli; Counterman, Brian A.; Scott, Maxwell J.; Jiggins, Chris D.; Papa, Riccardo; Martin, Arnaud; McMillan, W. O. (2019)
    To what extent can we predict how evolution occurs? Do genetic architectures and developmental processes canalize the evolution of similar outcomes in a predictable manner? Or do historical contingencies impose alternative ...
  • Papa, Riccardo; Kapan, Durrell D.; Counterman, Brian A.; Maldonado, Karla; Lindstrom, Daniel P.; Reed, Robert D.; Nijhout, H. F.; Hrbek, Tomas; McMillan, William Owen (2013)
  • Reed, Robert D.; Papa, Riccardo; Martin, Arnaud; Hines, Heather M.; Counterman, Brian A.; Pardo-Diaz, Carolina; Jiggins, Chris D.; Chamberlain, Nicola L.; Kronforst, Marcus R.; Chen, Rui; Halder, Georg; Nijhout, H. Frederik; McMillan, William Owen (2011)
    Mimicry whereby warning signals in different species evolve to look similar has long served as a paradigm of convergent evolution. Little is known, however, about the genes that underlie the evolution of mimetic phenotypes ...
  • De Jesus Villanueva, Christina N.; Falcon, Wilfredo; Velez-Zuazo, Ximena; Papa, Riccardo; Malone, Catherine Lyn (2021)
    Invasive populations of green iguanas (Iguanidae: Iguana iguana) are widely established beyond their native Central, South American, and Lesser Antillean range in various islands of the Pacific, Florida USA, and in the ...

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