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Browsing by Author "Hofreiter, Michael"

Browsing by Author "Hofreiter, Michael"

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  • Blue Turns to Gray: Paleogenomic Insights into the Evolutionary History and Extinction of the Blue Antelope (<I>Hippotragus leucophaeus</I>) 
    Hempel, Elisabeth; Bibi, Faysal; Faith, J. T.; Koepfli, Klaus-Peter; Klittich, Achim M.; Duchêne, David,A.; Brink, James S.; Kalthoff, Daniela C.; Dalén, Love; Hofreiter, Michael; Westbury, Michael V. (2022)
    The blue antelope (Hippotragus leucophaeus) is the only large African mammal species to have become extinct in historical times, yet no nuclear genomic information is available for this species. A recent study showed that ...
  • Diversity and Paleodemography of the Addax (Addax nasomaculatus), a Saharan Antelope on the Verge of Extinction 
    Hempel, Elisabeth; Westbury, Michael, V.; Grau, Jose H.; Trinks, Alexandra; Paijmans, Johanna L. A.; Kliver, Sergei; Barlow, Axel; Mayer, Frieder; Muller, Johannes; Chen, Lei; Koepfli, Klaus-Peter; Hofreiter, Michael; Bibi, Faysal (2021)
    Since the 19th century, the addax (Addax nasomaculatus) has lost approximately 99% of its former range. Along with its close relatives, the blue antelope (Hippotragus leucophaeus) and the scimitar-horned oryx (Oryx dammah), ...
  • Extraction of Ancient DNA from Plant Remains 
    Wales, Nathan; Kistler, Logan (Humana Press, 2019)
  • Improving draft genome contiguity with reference-derived in silico mate-pair libraries 
    Grau, Jose Horacio; Hackl, Thomas; Koepfli, Klaus-Peter; Hofreiter, Michael (2018)
    Background: Contiguous genome assemblies are a highly valued biological resource because of the higher number of completely annotated genes and genomic elements that are usable compared to fragmented draft genomes. ...
  • Interordinal gene capture, the phylogenetic position of Steller s sea cow based on molecular and morphological data, and the macroevolutionary history of Sirenia 
    Springer, Mark S.; Signore, Anthony V.; Paijmans, Johanna L. A.; Vélez-Juarbe, Jorge; Domning, Daryl P.; Bauer, Cameron E.; He, Kai; Crerar, Lorelei; Campos, Paula F.; Murphy, William J.; Meredith, Robert W.; Gatesy, John; Willerslev, Eske; MacPhee, Ross D. E.; Hofreiter, Michael; Campbell, Kevin L. (2015)
    The recently extinct (ca. 1768) Steller s sea cow (Hydrodamalis gigas) was a large, edentulous North Pacific sirenian. The phylogenetic affinities of this taxon to other members of this clade, living and extinct, are ...
  • Molecular Clocks and Archeogenomics of a Late Period Egyptian Date Palm Leaf Reveal Introgression from Wild Relatives and Add Timestamps on the Domestication 
    Perez-Escobar, Oscar A.; Bellot, Sidonie; Przelomska, Natalia A. S.; Flowers, Jonathan M.; Nesbitt, Mark; Ryan, Philippa; Gutaker, Rafal M.; Gros-Balthazard, Muriel; Wells, Tom; Kuhnhauser, Benedikt G.; Schley, Rowan; Bogarin, Diego; Dodsworth, Steven; Diaz, Rudy; Lehmann, Manuela; Petoe, Peter; Eiserhardt, Wolf L.; Preick, Michaela; Hofreiter, Michael; Hajdas, Irka; Purugganan, Michael; Antonelli, Alexandre; Gravendeel, Barbara; Leitch, Ilia J.; Jimenez, Maria Fernanda Torres; Papadopulos, Alexander S. T.; Chomicki, Guillaume; Renner, Susanne S.; Baker, William J. (2021)
    The date palm, Phoenix dactylifera, has been a cornerstone of Middle Eastern and North African agriculture for millennia. It was first domesticated in the Persian Gulf, and its evolution appears to have been influenced by ...
  • Multilocus Resolution of Phylogeny and Timescale in the Extant Adaptive Radiation of Hawaiian Honeycreepers 
    Lerner, Heather R L.; Meyer, Matthias; James, Helen F.; Hofreiter, Michael; Fleischer, Robert C. (2011)
  • A rapid loss of stripes: the evolutionary history of the extinct quagga 
    Leonard, Jennifer A.; Rohland, Nadin; Glaberman, Scott; Fleischer, Robert C.; Caccone, Adalgisa; Hofreiter, Michael (2005)
  • Recovery and analysis of ancient beetle DNA from subfossil packrat middens using high-throughput sequencing 
    Smith, Aaron D.; Kaminski, Marcin J.; Kanda, Kojun; Sweet, Andrew D.; Betancourt, Julio L.; Holmgren, Camille A.; Hempel, Elisabeth; Alberti, Federica; Hofreiter, Michael (2021)
    The study of ancient DNA is revolutionizing our understanding of paleo-ecology and the evolutionary history of species. Insects are essential components in many ecosystems and constitute the most diverse group of animals. ...
  • Species-specific responses of Late Quaternary megafauna to climate and humans 
    Lorenzen, Eline D.; Nogues-Bravo, David; Orlando, Ludovic; Weinstock, Jaco; Binladen, Jonas; Marske, Katharine A.; Ugan, Andrew; Borregaard, Michael K.; Gilbert, M. Thomas P.; Nielsen, Rasmus; Ho, Simon Y. W.; Goebel, Ted; Graf, Kelly E.; Byers, David; Stenderup, Jesper T.; Rasmussen, Morten; Campos, Paula F.; Leonard, Jennifer A.; Koepfli, Klaus-Peter; Froese, Duane; Zazula, Grant; Stafford, Jr, Thomas W.; Aaris-Sørensen, Kim; Batra, Persaram; Haywood, Alan M.; Singarayer, Joy S.; Valdes, Paul J.; Boeskorov, Gennady; Burns, James A.; Davydov, Sergey P.; Haile, James; Jenkins, Dennis L.; Kosintsev, Pavel; Kuznetsova, Tatyana; Lai, Xulong; Martin, Larry D.; McDonald, H. Gregory; Mol, Dick; Meldgaard, Morten; Munch, Kasper; Stephan, Elisabeth; Sablin, Mikhail; Sommer, Robert S.; Sipko, Taras; Scott, Eric; Suchard, Marc A.; Tikhonov, Alexei; Willerslev, Rane; Wayne, Robert K.; Cooper, Alan; Hofreiter, Michael; Sher, Andrei; Shapiro, Beth; Rahbek, Carsten; Willerslev, Eske (2011)
    Despite decades of research, the roles of climate and humans in driving the dramatic extinctions of large-bodied mammals during the Late Quaternary period remain contentious. Here we use ancient DNA, species distribution ...

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