DSpace Repository

Browsing by Author "Deck, John"

Browsing by Author "Deck, John"

Sort by: Order: Results:

  • Building a global genomics observatory: Using GEOME (the Genomic Observatories Metadatabase) to expedite and improve deposition and retrieval of genetic data and metadata for biodiversity research 
    Riginos, Cynthia; Crandall, Eric D.; Liggins, Libby; Gaither, Michelle R.; Ewing, Rodney B.; Meyer, Christopher; Andrews, Kimberly R.; Euclide, Peter T.; Titus, Benjamin M.; Overgaard Therkildsen, Nina; Salces-Castellano, Antonia; Stewart, Lucy C.; Toonen, Robert J.; Deck, John (2020)
  • A call for an international network of genomic observatories (GOs) 
    Davies, Neil; Meyer, Christopher P.; Gilbert, Jack A.; Amaral-Zettler, Linda; Deck, John; Bicak, Mesude; Rocca-Serra, Philippe; Assunta-Sansone, Susanna; Willis, Kathy; Field, Dawn (2012)
  • Clarifying Concepts and Terms in Biodiversity Informatics 
    Deck, John; Barker, Katharine; Beaman, Reed; Buttigieg, Pier Luigi; Droege, Gabriele; Guralnick, Robert; Miller, Chuck; Tuama, Eamonn O.; Murrell, Zack; Parr, Cynthia Sims; Robbins, Bob; Schigel, Dmitry; Stucky, Brian; Walls, Ramona; Wieczorek, John; Morrison, Norman; Wooley, John (2013)
  • Field Information Management Systems for DNA Barcoding 
    Deck, John; Gross, Joyce; Stones-Havas, Steven; Davies, Neil; Shapley, Rebecca; Meyer, Christopher (Humana Press, 2012)
  • The founding charter of the Genomic Observatories Network 
    Davies, Neil; Field, Dawn; Amaral-Zettler, Linda; Clark, Melody S.; Deck, John; Drummond, Alexei; Faith, Daniel P.; Geller, Jonathan; Gilbert, Jack; Glöckner, Frank Oliver; Hirsch, Penny; Leong, Jo-Ann; Meyer, Christopher P.; Obst, Matthias; Planes, Serge; Scholin, Chris; Vogler, Alfried P.; Gates, Ruth D.; Toonen, Robert J.; Berteaux-Lecellier, V.; Barbier, Michèle; Barker, Katherine; Bertilsson, Stefan; Bicak, Mesude; Bietz, Matthew J.; Bobe, Jason; Bodrossy, Levente; Borja, Angel; Coddington, Jonathan A.; Fuhrman, Jed; Gerdts, Gunnar; Gillespie, Rosemary; Goodwin, Kelly; Hanson, Paul C.; Hero, Jean-Marc; Hoekman, David; Jansson, Janet; Jeanthon, Christian; Kao, Rebecca; Klindworth, Anna; Knight, Rob; Kottmann, Renzo; Koo, Michelle S.; Kotoulas, Georgios; Lowe, Andrew J.; Marteinsson, Viggó Thór; Meyer, Folker; Morrison, Norman; Myrold, David D.; Pafilis, Evangelos; Parker, Stephanie; Parnell, J. J.; Polymenakou, Paraskevi N.; Ratnasingham, Sujeevan; Roderick, George K.; Rodriguez-Ezpeleta, Naiara; Schonrogge, Karsten; Simon, Nathalie; Valette-Silver, Nathalie; Springer, Yuri; Stone, Graham N.; Stones-Havas, Steve; Sansone, Susanna-Assunta; Thibault, Kate M.; Wecker, Patricia; Wichels, Antje; Wooley, John C.; Yahara, Tetsukazu; Zingone, Adriana (2014)
  • The Genomic Observatories Metadatabase (GeOMe): A new repository for field and sampling event metadata associated with genetic samples 
    Deck, John; Gaither, Michelle R.; Ewing, Rodney; Bird, Christopher E.; Davies, Neil; Meyer, Christopher; Riginos, Cynthia; Toonen, Robert J.; Crandall, Eric D. (2017)
    The Genomic Observatories Metadatabase (GeOMe, http://www.geome-db.org/) is an open access repository for geographic and ecological metadata associated with biosamples and genetic data. Whereas public databases have served ...
  • Internet of Samples 
    Richard, Stephen M.; Vieglais, Dave; Cui, Hong; Davies, Neil; Deck, John; Gan, Quan; Kansa, Eric C.; Kansa, Sarah Whitcher; Kunze, John; Mandel, Danny; Meyer, Christopher P.; Orrell, Thomas M.; Ramdeen, Sarah; Snyder, Rebecca A.; Walls, Ramona L.; Zhou, Yuxuan; Lehnert, Kerstin (2021)
  • Internet of Samples (iSamples): Toward an interdisciplinary cyberinfrastructure for material samples 
    Davies, Neil; Deck, John; Kansa, Eric C.; Kansa, Sarah Whitcher; Kunze, John; Meyer, Christopher; Orrell, Thomas; Ramdeen, Sarah; Snyder, Rebecca A.; Vieglais, Dave; Walls, Ramona L.; Lehnert, Kerstin (2021)
    Sampling the natural world and built environment underpins much of science, yet systems for managing material samples and associated (meta)data are fragmented across institutional catalogs, practices for identification, ...
  • Internet of Samples: Creating and Mapping Controlled Vocabularies for Specimen Type, Material Type, and Sampled Feature 
    Vieglais, Dave; Gan, Quan; Zhou, Yuxuan; Richard, Stephen; Cui, Hong; Davies, Neil; Deck, John; Kansa, Eric; Kansa, Sarah; Kunze, John; Mandel, Danny; Meyer, Christopher P.; Orrell, Thomas M.; Ramdeen, Sarah; Snyder, Rebecca A.; Walls, Ramona; Lehnert, Kerstin (2021)
  • Report of the 14th Genomic Standards Consortium Meeting, Oxford, UK, September 17-21, 2012 
    Davies, Neil; Field, Dawn; Amaral-Zettler, Linda; Bicak, Mesude; Bourlat, Sarah; Coddington, Jonathan A.; Deck, John; Drummond, Alexei; Gilbert, Jack A.; Glöckner, Frank Oliver; Kottmann, Renzo; Meyer, Christopher P.; Morrison, Norman; Obst, Matthias; Robbins, Robert; Schriml, Lynn; Sterk, Peter; Stones-Havas, Steven (2014)
  • Semantics in Support of Biodiversity Knowledge Discovery: An Introduction to the Biological Collections Ontology and Related Ontologies 
    Walls, Ramona L.; Deck, John; Guralnick, Robert; Baskauf, Steve; Beaman, Reed; Blum, Stanley; Bowers, Shawn; Buttigieg, Pier Luigi; Davies, Neil; Endresen, Dag; Gandolfo, Maria Alejandra; Hanner, Robert; Janning, Alyssa; Krishtalka, Leonard; Matsunaga, Andréa; Midford, Peter; Morrison, Norman; Tuama, Éamonn Ó.; Schildhauer, Mark; Smith, Barry; Stucky, Brian J.; Thomer, Andrea; Wieczorek, John; Whitacre, Jamie; Wooley, John (2014)
  • Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium 
    Davies, Neil; Field, Dawn; Gavaghan, David; Holbrook, Sally J.; Planes, Serge; Troyer, Matthias; Bonsall, Michael; Claudet, Joachim; Roderick, George; Schmitt, Russell J.; Zettler, Linda Amaral; Berteaux, Vé; Bossin, Hervé C.; Cabasse, Charlotte; Collin, Antoine; Deck, John; Dell, Tony; Dunne, Jennifer; Gates, Ruth; Harfoot, Mike; Hench, James L.; Hopuare, Marania; Kirch, Patrick; Kotoulas, Georgios; Kosenkov, Alex; Kusenko, Alex; Leichter, James J.; Lenihan, Hunter; Magoulas, Antonios; Martinez, Neo; Meyer, Chris; Stoll, Benoit; Swalla, Billie; Tartakovsky, Daniel M.; Murphy, Hinano Teavai; Turyshev, Slava; Valdvinos, Fernanda; Williams, Rich; Wood, Spencer; Consortium, IDEA (2016)
  • Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium 
    Davies, Neil; Field, Dawn; Gavaghan, David; Holbrook, Sally J.; Planes, Serge; Troyer, Matthias; Bonsall, Michael; Claudet, Joachim; Roderick, George; Schmitt, Russell J.; Zettler, Linda Amaral; Berteaux, Vé; Bossin, Hervé C.; Cabasse, Charlotte; Collin, Antoine; Deck, John; Dell, Tony; Dunne, Jennifer; Gates, Ruth; Harfoot, Mike; Hench, James L.; Hopuare, Marania; Kirch, Patrick; Kotoulas, Georgios; Kosenkov, Alex; Kusenko, Alex; Leichter, James J.; Lenihan, Hunter; Magoulas, Antonios; Martinez, Neo; Meyer, Christopher; Stoll, Benoit; Swalla, Billie; Tartakovsky, Daniel M.; Murphy, Hinano Teavai; Turyshev, Slava; Valdvinos, Fernanda; Williams, Rich; Wood, Spencer (2016)
    Systems biology promises to revolutionize medicine, yet human wellbeing is also inherently linked to healthy societies and environments (sustainability). The IDEA Consortium is a systems ecology open science initiative to ...
  • A solution to the challenges of interdisciplinary aggregation and use of specimen-level trait data 
    Balk, Meghan A.; Deck, John; Emery, Kitty F.; Walls, Ramona L.; Reuter, Dana; LaFrance, Raphael; Arroyo-Cabrales, Joaqu; Barrett, Paul; Blois, Jessica; Boileau, Arianne; Brenskelle, Laura; Cannarozzi, Nicole R.; Cruz, J. A.; Dávalos, Liliana M.; de la Sancha, Noé U.; Gyawali, Prasiddhi; Hantak, Maggie M.; Hopkins, Samantha; Kohli, Brooks; King, Jessica N.; Koo, Michelle S.; Lawing, A. M.; Machado, Helena; McCrane, Samantha M.; McLean, Bryan; Morgan, Michèle E.; Pilaar Birch, Suzanne; Reed, Denne; Reitz, Elizabeth J.; Sewnath, Neeka; Upham, Nathan S.; Villaseñor, Amelia; Yohe, Laurel; Davis, Edward B.; Guralnick, Robert P. (2022)

Search DSpace

Browse

My Account