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Browsing by Author "Davies, Neil"

Browsing by Author "Davies, Neil"

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  • A call for an international network of genomic observatories (GOs) 
    Davies, Neil; Meyer, Christopher P.; Gilbert, Jack A.; Amaral-Zettler, Linda; Deck, John; Bicak, Mesude; Rocca-Serra, Philippe; Assunta-Sansone, Susanna; Willis, Kathy; Field, Dawn (2012)
  • Categorization of species as native or nonnative using DNA sequence signatures without a complete reference library 
    Andersen, Jeremy C.; Oboyski, Peter; Davies, Neil; Charlat, Sylvain; Ewing, Curtis; Meyer, Christopher; Krehenwinkel, Henrik; Lim, Jun Ying; Suzuki, Noriyuki; Ramage, Thibault; Gillespie, Rosemary G.; Roderick, George K. (2019)
    New genetic diagnostic approaches have greatly aided efforts to document global biodiversity and improve biosecurity. This is especially true for organismal groups in which species diversity has been underestimated ...
  • Field Information Management Systems for DNA Barcoding 
    Deck, John; Gross, Joyce; Stones-Havas, Steven; Davies, Neil; Shapley, Rebecca; Meyer, Christopher (Humana Press, 2012)
  • The founding charter of the Genomic Observatories Network 
    Davies, Neil; Field, Dawn; Amaral-Zettler, Linda; Clark, Melody S.; Deck, John; Drummond, Alexei; Faith, Daniel P.; Geller, Jonathan; Gilbert, Jack; Glöckner, Frank Oliver; Hirsch, Penny; Leong, Jo-Ann; Meyer, Christopher P.; Obst, Matthias; Planes, Serge; Scholin, Chris; Vogler, Alfried P.; Gates, Ruth D.; Toonen, Robert J.; Berteaux-Lecellier, V.; Barbier, Michèle; Barker, Katherine; Bertilsson, Stefan; Bicak, Mesude; Bietz, Matthew J.; Bobe, Jason; Bodrossy, Levente; Borja, Angel; Coddington, Jonathan A.; Fuhrman, Jed; Gerdts, Gunnar; Gillespie, Rosemary; Goodwin, Kelly; Hanson, Paul C.; Hero, Jean-Marc; Hoekman, David; Jansson, Janet; Jeanthon, Christian; Kao, Rebecca; Klindworth, Anna; Knight, Rob; Kottmann, Renzo; Koo, Michelle S.; Kotoulas, Georgios; Lowe, Andrew J.; Marteinsson, Viggó Thór; Meyer, Folker; Morrison, Norman; Myrold, David D.; Pafilis, Evangelos; Parker, Stephanie; Parnell, J. J.; Polymenakou, Paraskevi N.; Ratnasingham, Sujeevan; Roderick, George K.; Rodriguez-Ezpeleta, Naiara; Schonrogge, Karsten; Simon, Nathalie; Valette-Silver, Nathalie; Springer, Yuri; Stone, Graham N.; Stones-Havas, Steve; Sansone, Susanna-Assunta; Thibault, Kate M.; Wecker, Patricia; Wichels, Antje; Wooley, John C.; Yahara, Tetsukazu; Zingone, Adriana (2014)
  • The founding charter of the Omic Biodiversity Observation Network (Omic BON) 
    Meyer, Raissa; Davies, Neil; Pitz, Kathleen J.; Meyer, Chris; Samuel, Robyn; Anderson, Jane; Appeltans, Ward; Barker, Katharine; Chavez, Francisco P.; Duffy, J. Emmett; Goodwin, Kelly D.; Hudson, Maui; Hunter, Margaret E.; Karstensen, Johannes; Laney, Christine M.; Leinen, Margaret; Mabee, Paula; Macklin, James A.; Muller-Karger, Frank; Pade, Nicolas; Pearlman, Jay; Phillips, Lori; Provoost, Pieter; Santi, Ioulia; Schigel, Dmitry; Schriml, Lynn M.; Soccodato, Alice; Suominen, Saara; Thibault, Katherine M.; Ung, Visotheary; van de Kamp, Jodie; Wallis, Elycia; Walls, Ramona; Buttigieg, Pier Luigi; Omic BON Exploratory Comm; Omic BON Advisory Comm (2022)
    Omic BON is a thematic Biodiversity Observation Network under the Group on Earth Observations Biodiversity Observation Network (GEO BON), focused on coordinating the observation of biomolecules in organisms and the ...
  • The Genomic Observatories Metadatabase (GeOMe): A new repository for field and sampling event metadata associated with genetic samples 
    Deck, John; Gaither, Michelle R.; Ewing, Rodney; Bird, Christopher E.; Davies, Neil; Meyer, Christopher; Riginos, Cynthia; Toonen, Robert J.; Crandall, Eric D. (2017)
    The Genomic Observatories Metadatabase (GeOMe, http://www.geome-db.org/) is an open access repository for geographic and ecological metadata associated with biosamples and genetic data. Whereas public databases have served ...
  • The Historical Biogeography of Two Caribbean Butterflies (Lepidoptera: Heliconiidae) As Inferred From Genetic Variation at Multiple Loci 
    Davies, Neil; Bermingham, Eldredge (2002)
  • Inferences From a Rapidly Moving Hybrid Zone 
    Dasmahapatra, Kanchon K.; Blum, Michael J.; Aiello, Annette; Hackwell, Stuart; Davies, Neil; Bermingham, Eldredge; Mallet, James (2002)
  • Internet of Samples 
    Richard, Stephen M.; Vieglais, Dave; Cui, Hong; Davies, Neil; Deck, John; Gan, Quan; Kansa, Eric C.; Kansa, Sarah Whitcher; Kunze, John; Mandel, Danny; Meyer, Christopher P.; Orrell, Thomas M.; Ramdeen, Sarah; Snyder, Rebecca A.; Walls, Ramona L.; Zhou, Yuxuan; Lehnert, Kerstin (2021)
  • Internet of Samples (iSamples): Toward an interdisciplinary cyberinfrastructure for material samples 
    Davies, Neil; Deck, John; Kansa, Eric C.; Kansa, Sarah Whitcher; Kunze, John; Meyer, Christopher; Orrell, Thomas; Ramdeen, Sarah; Snyder, Rebecca A.; Vieglais, Dave; Walls, Ramona L.; Lehnert, Kerstin (2021)
    Sampling the natural world and built environment underpins much of science, yet systems for managing material samples and associated (meta)data are fragmented across institutional catalogs, practices for identification, ...
  • Internet of Samples: Creating and Mapping Controlled Vocabularies for Specimen Type, Material Type, and Sampled Feature 
    Vieglais, Dave; Gan, Quan; Zhou, Yuxuan; Richard, Stephen; Cui, Hong; Davies, Neil; Deck, John; Kansa, Eric; Kansa, Sarah; Kunze, John; Mandel, Danny; Meyer, Christopher P.; Orrell, Thomas M.; Ramdeen, Sarah; Snyder, Rebecca A.; Walls, Ramona; Lehnert, Kerstin (2021)
  • La especiación en dos mariposas neotropicales: extensión de la regla de Haldane 
    Davies, Neil; Aiello, Annette; Mallet, James; Pomakowski, Andrew; Silberglied, Robert E. (Editora Nova Art, 2007)
  • The ocean sampling day consortium 
    Kopf, Anna; Bicak, Mesude; Kottmann, Renzo; Schnetzer, Julia; Kostadinov, Ivaylo; Lehmann, Katja; Fernandez-Guerra, Antonio; Jeanthon, Christian; Rahav, Eyal; Ullrich, Matthias; Wichels, Antje; Gerdts, Gunnar; Polymenakou, Paraskevi; Kotoulas, Giorgos; Siam, Rania; Abdallah, Rehab Z.; Sonnenschein, Eva C.; Cariou, Thierry; O'Gara, Fergal; Jackson, Stephen; Orlic, Sandi; Steinke, Michael; Busch, Julia; Duarte, Bernardo; Caçador, Isabel; Canning-Clode, João; Bobrova, Oleksandra; Marteinsson, Viggo; Reynisson, Eyjolfur; Loureiro, Clara Magalhães; Luna, Gian Marco; Quero, Grazia Marina; Löscher, Carolin,R.; Kremp, Anke; DeLorenzo, Marie E.; Øvreås, Lise; Tolman, Jennifer; LaRoche, Julie; Penna, Antonella; Frischer, Marc; Davis, Timothy; Katherine, Barker; Meyer, Christopher P.; Ramos, Sandra; Magalhães, Catarina; Jude-Lemeilleur, Florence; Aguirre-Macedo, Ma; Wang, Shiao; Poulton, Nicole; Jones, Scott; Collin, Rachel; Fuhrman, Jed A.; Conan, Pascal; Alonso, Cecilia; Stambler, Noga; Goodwin, Kelly; Yakimov, Michael M.; Baltar, Federico; Bodrossy, Levente; Kamp, Van De; Frampton, Dion M. F.; Ostrowski, Martin; Van Ruth, Paul; Malthouse, Paul; Claus, Simon; Deneudt, Klaas; Mortelmans, Jonas; Pitois, Sophie; Wallom, David; Salter, Ian; Costa, Rodrigo; Schroeder, Declan C.; Kandil, Mahrous M.; Amaral, Valentina; Biancalana, Florencia; Santana, Rafael; Pedrotti, Maria Luiza; Yoshida, Takashi; Ogata, Hiroyuki; Ingleton, Tim; Munnik, Kate; Rodriguez-Ezpeleta, Naiara; Berteaux-Lecellier, Veronique; Wecker, Patricia; Cancio, Ibon; Vaulot, Daniel; Bienhold, Christina; Ghazal, Hassan; Chaouni, Bouchra; Essayeh, Soumya; Ettamimi, Sara; Zaid, El Houcine; Boukhatem, Noureddine; Bouali, Abderrahim; Chahboune, Rajaa; Barrijal, Said; Timinouni, Mohammed; El Otmani, Fatima; Bennani, Mohamed; Mea, Marianna; Todorova, Nadezhda; Karamfilov, Ventzislav; ten Hoopen, Petra; Cochrane, Guy; L'Haridon, Stephane; Bizsel, Kemal Can; Vezzi, Alessandro; Lauro, Federico M.; Martin, Patrick; Jensen, Rachelle M.; Hinks, Jamie; Gebbels, Susan; Rosselli, Riccardo; De Pascale, Fabio; Schiavon, Riccardo; dos Santos, Antonina; Villar, Emilie; Pesant, Stéphane; Cataletto, Bruno; Malfatti, Francesca; Edirisinghe, Ranjith; Silveira, Jorge A. Herrera; Barbier, Michele; Turk, Valentina; Tinta, Tinkara; Fuller, Wayne J.; Salihoglu, Ilkay; Serakinci, Nedime; Ergoren, Mahmut Cerkez; Bresnan, Eileen; Iriberri, Juan; Nyhus, Paul Anders Fronth; Bente, Edvardsen; Karlsen, Hans Erik; Golyshin, Peter N.; Gasol, Josep M.; Moncheva, Snejana; Dzhembekova, Nina; Johnson, Zackary; Sinigalliano, Christopher David; Gidley, Maribeth Louise; Zingone, Adriana; Danovaro, Roberto; Tsiamis, George; Clark, Melody S.; Costa, Ana Cristina; El Bour, Monia; Martins, Ana M.; Collins, R. E.; Ducluzeau, Anne-Lise; Martinez, Jonathan; Costello, Mark J.; Amaral-Zettler, Linda; Gilbert, Jack A.; Davies, Neil; Field, Dawn; Glöckner, Frank Oliver (2015)
    Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world's oceans. ...
  • Report of the 14th Genomic Standards Consortium Meeting, Oxford, UK, September 17-21, 2012 
    Davies, Neil; Field, Dawn; Amaral-Zettler, Linda; Bicak, Mesude; Bourlat, Sarah; Coddington, Jonathan A.; Deck, John; Drummond, Alexei; Gilbert, Jack A.; Glöckner, Frank Oliver; Kottmann, Renzo; Meyer, Christopher P.; Morrison, Norman; Obst, Matthias; Robbins, Robert; Schriml, Lynn; Sterk, Peter; Stones-Havas, Steven (2014)
  • Semantics in Support of Biodiversity Knowledge Discovery: An Introduction to the Biological Collections Ontology and Related Ontologies 
    Walls, Ramona L.; Deck, John; Guralnick, Robert; Baskauf, Steve; Beaman, Reed; Blum, Stanley; Bowers, Shawn; Buttigieg, Pier Luigi; Davies, Neil; Endresen, Dag; Gandolfo, Maria Alejandra; Hanner, Robert; Janning, Alyssa; Krishtalka, Leonard; Matsunaga, Andréa; Midford, Peter; Morrison, Norman; Tuama, Éamonn Ó.; Schildhauer, Mark; Smith, Barry; Stucky, Brian J.; Thomer, Andrea; Wieczorek, John; Whitacre, Jamie; Wooley, John (2014)
  • Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium 
    Davies, Neil; Field, Dawn; Gavaghan, David; Holbrook, Sally J.; Planes, Serge; Troyer, Matthias; Bonsall, Michael; Claudet, Joachim; Roderick, George; Schmitt, Russell J.; Zettler, Linda Amaral; Berteaux, Vé; Bossin, Hervé C.; Cabasse, Charlotte; Collin, Antoine; Deck, John; Dell, Tony; Dunne, Jennifer; Gates, Ruth; Harfoot, Mike; Hench, James L.; Hopuare, Marania; Kirch, Patrick; Kotoulas, Georgios; Kosenkov, Alex; Kusenko, Alex; Leichter, James J.; Lenihan, Hunter; Magoulas, Antonios; Martinez, Neo; Meyer, Chris; Stoll, Benoit; Swalla, Billie; Tartakovsky, Daniel M.; Murphy, Hinano Teavai; Turyshev, Slava; Valdvinos, Fernanda; Williams, Rich; Wood, Spencer; Consortium, IDEA (2016)
  • Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium 
    Davies, Neil; Field, Dawn; Gavaghan, David; Holbrook, Sally J.; Planes, Serge; Troyer, Matthias; Bonsall, Michael; Claudet, Joachim; Roderick, George; Schmitt, Russell J.; Zettler, Linda Amaral; Berteaux, Vé; Bossin, Hervé C.; Cabasse, Charlotte; Collin, Antoine; Deck, John; Dell, Tony; Dunne, Jennifer; Gates, Ruth; Harfoot, Mike; Hench, James L.; Hopuare, Marania; Kirch, Patrick; Kotoulas, Georgios; Kosenkov, Alex; Kusenko, Alex; Leichter, James J.; Lenihan, Hunter; Magoulas, Antonios; Martinez, Neo; Meyer, Christopher; Stoll, Benoit; Swalla, Billie; Tartakovsky, Daniel M.; Murphy, Hinano Teavai; Turyshev, Slava; Valdvinos, Fernanda; Williams, Rich; Wood, Spencer (2016)
    Systems biology promises to revolutionize medicine, yet human wellbeing is also inherently linked to healthy societies and environments (sustainability). The IDEA Consortium is a systems ecology open science initiative to ...
  • Speciation in two neotropical butterflies: extending Haldane's rule 
    Davies, Neil; Aiello, Annette; Mallet, James; Pomiankowski, Andrew; Silberglied, Robert E. (1997)
  • Toward a Global Public Repository of Community Protocols to Encourage Best Practices in Biomolecular Ocean Observing and Research 
    Samuel, Robyn M.; Meyer, Raissa; Buttigieg, Pier Luigi; Davies, Neil; Jeffery, Nicholas W.; Meyer, Christopher P.; Pavloudi, Christina; Pitz, Kathleen Johnson; Sweetlove, Maxime; Theroux, Susanna; van de Kamp, Jodie; Watts, Alison (2021)
    Biomolecular ocean observing and research is a rapidly evolving field that uses omics approaches to describe biodiversity at its foundational level, giving insight into the structure and function of marine ecosystems over ...

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