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Browsing by Author "Edwards, Scott V."

Browsing by Author "Edwards, Scott V."

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  • Comparative genomics reveals insights into avian genome evolution and adaptation 
    Zhang, Guojie; Li, Cai; Li, Qiye; Li, Bo; Larkin, Denis M.; Lee, Chul; Storz, Jay F.; Antunes, Agostinho; Greenwold, Matthew J.; Meredith, Robert W.; Ödeen, Anders; Cui, Jie; Zhou, Qi; Xu, Luohao; Pan, Hailin; Wang, Zongji; Jin, Lijun; Zhang, Pei; Hu, Haofu; Yang, Wei; Hu, Jiang; Xiao, Jin; Yang, Zhikai; Liu, Yang; Xie, Qiaolin; Yu, Hao; Lian, Jinmin; Wen, Ping; Zhang, Fang; Li, Hui; Zeng, Yongli; Xiong, Zijun; Liu, Shiping; Zhou, Long; Huang, Zhiyong; An, Na; Wang, Jie; Zheng, Qiumei; Xiong, Yingqi; Wang, Guangbiao; Wang, Bo; Wang, Jingjing; Fan, Yu; Fonseca, Rute R. da; Alfaro-Núñez, Alonzo; Schubert, Mikkel; Orlando, Ludovic; Mourier, Tobias; Howard, Jason T.; Ganapathy, Ganeshkumar; Pfenning, Andreas; Whitney, Osceola; Rivas, Miriam V.; Hara, Erina; Smith, Julia; Farré, Marta; Narayan, Jitendra; Slavov, Gancho; Romanov, Michael N.; Borges, Rui; Machado, João Paulo; Khan, Imran; Springer, Mark S.; Gatesy, John; Hoffmann, Federico G.; Opazo, Juan C.; Håstad, Olle; Sawyer, Roger H.; Kim, Heebal; Kim, Kyu-Won; Kim, Hyeon Jeong; Cho, Seoae; Li, Ning; Huang, Yinhua; Bruford, Michael W.; Zhan, Xiangjiang; Dixon, Andrew; Bertelsen, Mads F.; Derryberry, Elizabeth P.; Warren, Wesley; Wilson, Richard K.; Li, Shengbin; Ray, David A.; Green, Richard E.; O'Brien, Stephen J.; Griffin, Darren; Johnson, Warren E.; Haussler, David; Ryder, Oliver A.; Willerslev, Eske; Graves, Gary R.; Alström, Per; Fjeldså, Jon; Mindell, David P.; Edwards, Scott V.; Braun, Edward L.; Rahbek, Carsten; Burt, David W.; Houde, Peter; Zhang, Yong; Yang, Huanming; Wang, Jian; Jarvis, Erich D.; Gilbert, M. T.; Wang, Jun; Ye, Chen; Liang, Shaoguang; Yan, Zengli; Zepeda, M. L.; Campos, Paula F.; Velazquez, Amhed Missael Vargas; Samaniego, José Alfredo; Avila-Arcos, Mar; Martin, Michael D.; Barnett, Ross; Ribeiro, Angela M.; Mello, Claudio V.; Lovell, Peter V.; Almeida, Daniela; Maldonado, Emanuel; Pereira, Joana; Sunagar, Kartik; Philip, Siby; Dominguez-Bello, Maria; Bunce, Michael; Lambert, David; Brumfield, Robb T.; Sheldon, Frederick H.; Holmes, Edward C.; Gardner, Paul P.; Steeves, Tammy E.; Stadler, Peter F.; Burge, Sarah W.; Lyons, Eric; Smith, Jacqueline; McCarthy, Fiona; Pitel, Frederique; Rhoads, Douglas; Froman, David P. (2014)
    Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant ...
  • Dense sampling of bird diversity increases power of comparative genomics 
    Feng, Shaohong; Stiller, Josefin; Deng, Yuan; Armstrong, Joel; Fang, Qi; Reeve, Andrew Hart; Xie, Duo; Chen, Guangji; Guo, Chunxue; Faircloth, Brant C.; Petersen, Bent; Wang, Zongji; Zhou, Qi; Diekhans, Mark; Chen, Wanjun; Andreu-Sánchez, Sergio; Margaryan, Ashot; Howard, Jason Travis; Parent, Carole; Pacheco, George; Sinding, Mikkel-Holger S.; Puetz, Lara; Cavill, Emily; Ribeiro, Ângela M.; Eckhart, Leopold; Fjeldså, Jon; Hosner, Peter A.; Brumfield, Robb T.; Christidis, Les; Bertelsen, Mads F.; Sicheritz-Ponten, Thomas; Tietze, Dieter Thomas; Robertson, Bruce C.; Song, Gang; Borgia, Gerald; Claramunt, Santiago; Lovette, Irby J.; Cowen, Saul J.; Njoroge, Peter; Dumbacher, John Philip; Ryder, Oliver A.; Fuchs, Jérôme; Bunce, Michael; Burt, David W.; Cracraft, Joel; Meng, Guanliang; Hackett, Shannon J.; Ryan, Peter G.; Jønsson, Knud Andreas; Jamieson, Ian G.; da Fonseca, Rute R.; Braun, Edward L.; Houde, Peter; Mirarab, Siavash; Suh, Alexander; Hansson, Bengt; Ponnikas, Suvi; Sigeman, Hanna; Stervander, Martin; Frandsen, Paul B.; van der Zwan, Henriette; van der Sluis, Rencia; Visser, Carina; Balakrishnan, Christopher N.; Clark, Andrew G.; Fitzpatrick, John W.; Bowman, Reed; Chen, Nancy; Cloutier, Alison; Sackton, Timothy B.; Edwards, Scott V.; Foote, Dustin J.; Shakya, Subir B.; Sheldon, Frederick H.; Vignal, Alain; Soares, André E. R.; Shapiro, Beth; González-Solís, Jacob; Ferrer-Obiol, Joan; Rozas, Julio; Riutort, Marta; Tigano, Anna; Friesen, Vicki; Dalén, Love; Urrutia, Araxi O.; Székely, Tamás; Liu, Yang; Campana, Michael G.; Corvelo, André; Fleischer, Robert C.; Rutherford, Kim M.; Gemmell, Neil J.; Dussex, Nicolas; Mouritsen, Henrik; Thiele, Nadine; Delmore, Kira; Liedvogel, Miriam; Franke, Andre; Hoeppner, Marc P.; Krone, Oliver; Fudickar, Adam M.; Milá, Borja; Ketterson, Ellen D.; Fidler, Andrew Eric; Friis, Guillermo; Parody-Merino, Ángela M.; Battley, Phil F.; Cox, Murray P.; Lima, Nicholas Costa Barroso; Prosdocimi, Francisco; Parchman, Thomas Lee; Schlinger, Barney A.; Loiselle, Bette A.; Blake, John G.; Lim, Haw Chuan; Day, Lainy B.; Fuxjager, Matthew J.; Baldwin, Maude W.; Braun, Michael J.; Wirthlin, Morgan; Dikow, Rebecca B.; Ryder, T. B.; Camenisch, Glauco; Keller, Lukas F.; DaCosta, Jeffrey M.; Hauber, Mark E.; Louder, Matthew I. M.; Witt, Christopher C.; McGuire, Jimmy A.; Mudge, Joann; Megna, Libby C.; Carling, Matthew D.; Wang, Biao; Taylor, Scott A.; Del-Rio, Glaucia; Aleixo, Alexandre; Vasconcelos, Ana Tereza Ribeiro; Mello, Claudio V.; Weir, Jason T.; Haussler, David; Li, Qiye; Yang, Huanming; Wang, Jian; Lei, Fumin; Rahbek, Carsten; Gilbert, M. T.; Graves, Gary R.; Jarvis, Erich D.; Paten, Benedict; Zhang, Guojie (2020)
    Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity1–4. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captures only a ...
  • The Earth BioGenome Project 2020: Starting the clock 
    Lewin, Harris A.; Richards, Stephen; Lieberman Aiden, Erez; Allende, Miguel L.; Archibald, John M.; Bálint, Miklós; Barker, Katharine B.; Baumgartner, Bridget; Belov, Katherine; Bertorelle, Giorgio; Blaxter, Mark L.; Cai, Jing; Caperello, Nicolette D.; Carlson, Keith; Castilla-Rubio, Juan; Chaw, Shu-Miaw; Chen, Lei; Childers, Anna K.; Coddington, Jonathan A.; Conde, Dalia A.; Corominas, Montserrat; Crandall, Keith A.; Crawford, Andrew J.; DiPalma, Federica; Durbin, Richard; Ebenezer, ThankGod E.; Edwards, Scott V.; Fedrigo, Olivier; Flicek, Paul; Formenti, Giulio; Gibbs, Richard A.; Gilbert, M. T.; Goldstein, Melissa M.; Graves, Jennifer Marshall; Greely, Henry T.; Grigoriev, Igor V.; Hackett, Kevin J.; Hall, Neil; Haussler, David; Helgen, Kristofer M.; Hogg, Carolyn J.; Isobe, Sachiko; Jakobsen, Kjetill Sigurd; Janke, Axel; Jarvis, Erich D.; Johnson, Warren E.; Jones, Steven J. M.; Karlsson, Elinor K.; Kersey, Paul J.; Kim, Jin-Hyoung; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Leebens-Mack, James; Li, Xueyan; Lindblad-Toh, Kerstin; Liu, Xin; Lopez, Jose V.; Marques-Bonet, Tomas; Mazard, Sophie; Mazet, Jonna A. K.; Mazzoni, Camila J.; Myers, Eugene W.; O'Neill, Rachel J.; Paez, Sadye; Park, Hyun; Robinson, Gene E.; Roquet, Cristina; Ryder, Oliver A.; Sabir, Jamal S. M.; Shaffer, H. B.; Shank, Timothy M.; Sherkow, Jacob S.; Soltis, Pamela S.; Tang, Boping; Tedersoo, Leho; Uliano-Silva, Marcela; Wang, Kun; Wei, Xiaofeng; Wetzer, Regina; Wilson, Julia L.; Xu, Xun; Yang, Huanming; Yoder, Anne D.; Zhang, Guojie (2022)
  • Earth BioGenome Project: Sequencing life for the future of life 
    Lewin, Harris A.; Robinson, Gene E.; Kress, W. John; Baker, William J.; Coddington, Jonathan; Crandall, Keith A.; Durbin, Richard; Edwards, Scott V.; Forest, Felix; Gilbert, M. Thomas P.; Goldstein, Melissa M.; Grigoriev, Igor V.; Hackett, Kevin J.; Haussler, David; Jarvis, Erich D.; Johnson, Warren E.; Patrinos, Aristides; Richards, Stephen; Castilla-Rubio, Juan Carlos; van Sluys, Marie-Anne; Soltis, Pamela S.; Xu, Xun; Yang, Huanming; Zhang, Guojie (2018)
    Increasing our understanding of Earth's biodiversity and responsibly stewarding its resources are among the most crucial scientific and social challenges of the new millennium. These challenges require fundamental new ...
  • The evolution of a tropical biodiversity hotspot 
    Harvey, Michael G.; Bravo, Gustavo A.; Claramunt, Santiago; Cuervo, Andrés M.; Derryberry, Graham E.; Battilana, Jaqueline; Seeholzer, Glenn F.; McKay, Jessica Shearer; O'Meara, Brian C.; Faircloth, Brant C.; Edwards, Scott V.; Pérez-Emán, Jorge; Moyle, Robert G.; Sheldon, Frederick H.; Aleixo, Alexandre; Smith, Brian Tilston; Chesser, R. T.; Silveira, Luís Fábio; Cracraft, Joel; Brumfield, Robb T.; Derryberry, Elizabeth P. (2020)
    The tropics are the source of most biodiversity yet inadequate sampling obscures answers to fundamental questions about how this diversity evolves. We leveraged samples assembled over decades of fieldwork to study ...
  • The genome of the green anole lizard and a comparative analysis with birds and mammals 
    Alföldi, Jessica; Di Palma, Frederica; Grabherr, Manfred; Williams, Christina; Kong, Lesheng; Mauceli, Evan; Russell, Pamela; Lowe, Craig B.; Glor, Richard E.; Jaffe, Jacob D.; Ray, David A.; Boissinot, Stephane; Shedlock, Andrew M.; Botka, Christopher; Castoe, Todd A.; Colbourne, John K.; Fujita, Matthew K.; Moreno, Ricardo Godinez; Boudewijn, F. Ten Hallers; Haussler, David; Heger, Andreas; Heiman, David; Janes, Daniel E.; Johnson, Jeremy; de Jong, Pieter J.; Koriabine, Maxim Y.; Lara, Marcia; Novick, Peter A.; Organ, Chris L.; Peach, Sally E.; Poe, Steven; Pollock, David D.; de Queiroz, Kevin; Sanger, Thomas; Searle, Steve; Smith, Jeremy D.; Smith, Zachary; Swofford, Ross; Turner-Maier, Jason; Wade, Juli; Young, Sarah; Zadissa, Amonida; Edwards, Scott V.; Glenn, Travis C.; Schneider, Christopher J.; Losos, Jonathan B.; Lander, Eric S.; Breen, Matthew; Ponting, Chris P.; Lindblad-Toh, Kerstin (2011)
  • Genomics of host-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales 
    Näpflin, Kathrin; O'Connor, Emily A.; Becks, Lutz; Bensch, Staffan; Ellis, Vincenzo A.; Hafer-Hahmann, Nina; Harding, Karin C.; Lindén, Sara K.; Olsen, Morten T.; Roved, Jacob; Sackton, Timothy B.; Shultz, Allison J.; Venkatakrishnan, Vignesh; Videvall, Elin; Westerdahl, Helena; Winternitz, Jamie C.; Edwards, Scott V. (2019)
    Evolutionary genomics has recently entered a new era in the study of host-pathogen interactions. A variety of novel genomic techniques has transformed the identification, detection and classification of both hosts and ...
  • Molecular adaptations for sensing and securing prey and insight into amniote genome diversity from the garter snake genome 
    Perry, Blair W.; Card, Daren C.; McGlothlin, Joel W.; Pasquesi, Giulia I. M.; Adams, Richard H.; Schield, Drew R.; Hales, Nicole R.; Corbin, Andrew B.; Demuth, Jeffery P.; Hoffmann, Federico G.; Vandewege, Michael W.; Schott, Ryan K.; Bhattacharyya, Nihar; Chang, Belinda S. W.; Casewell, Nicholas R.; Whiteley, Gareth; Reyes-Velasco, Jacobo; Mackessy, Stephen P.; Storey, Kenneth B.; Biggar, Kyle K.; Passow, Courtney N.; Kuo, Chih-Horng; McGaugh, Suzanne E.; Bronikowski, Anne M.; de Koning, Jason; Edwards, Scott V.; Pfrender, Michael E.; Minx, Patrick; Brodie,Edmund D., III; Brodie,Edmund D., Jr.; Warren, Wesley C.; Castoe, Todd A. (2018)
    Colubridae represents the most phenotypically diverse and speciose family of snakes, yet no well-assembled and annotated genome exists for this lineage. Here we report and analyze the genome of the garter snake, Thamnophis ...
  • Multilocus phylogeography, population genetics and niche evolution of Australian brown and black-tailed treecreepers (Aves: <i>Climacteris</i> ) 
    Edwards, Scott V.; Tonini, João F. R.; Mcinerney, Nancy; Welch, Corey; Beerli, Peter (2023)
    The Carpentarian barrier across north-eastern Australia is a major biogeographic barrier and a generator of biodiversity within the Australian Monsoonal Tropics. Here we present a continent-wide analysis of mitochondrial ...
  • Publisher Correction: The tuatara genome reveals ancient features of amniote evolution 
    Gemmell, Neil J.; Rutherford, Kim; Prost, Stefan; Tollis, Marc; Winter, David; Macey, J. R.; Adelson, David L.; Suh, Alexander; Bertozzi, Terry; Grau, José H.; Organ, Chris; Gardner, Paul P.; Muffato, Matthieu; Patricio, Mateus; Billis, Konstantinos; Martin, Fergal J.; Flicek, Paul; Petersen, Bent; Kang, Lin; Michalak, Pawel; Buckley, Thomas R.; Wilson, Melissa; Cheng, Yuanyuan; Miller, Hilary; Schott, Ryan K.; Jordan, Melissa D.; Newcomb, Richard D.; Arroyo, José Ignacio; Valenzuela, Nicole; Hore, Tim A.; Renart, Jaime; Peona, Valentina; Peart, Claire R.; Warmuth, Vera M.; Zeng, Lu; Kortschak, R. D.; Raison, Joy M.; Zapata, Valeria Velásquez; Wu, Zhiqiang; Santesmasses, Didac; Mariotti, Marco; Guigó, Roderic; Rupp, Shawn M.; Twort, Victoria G.; Dussex, Nicolas; Taylor, Helen; Abe, Hideaki; Bond, Donna M.; Paterson, James M.; Mulcahy, Daniel G.; González, Vanessa L.; Barbieri, Charles G.; DeMeo, Dustin P.; Pabinger, Stephan; Van Stijn, Tracey; Clarke, Shannon; Ryder, Oliver; Edwards, Scott V.; Salzberg, Steven L.; Anderson, Lindsay; Nelson, Nicola; Stone, Clive (2020)
  • Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes 
    St John, John A.; Braun, Edward L.; Isberg, Sally R.; Miles, Lee G.; Chong, Amanda Y.; Gongora, Jaime; Dalzell, Pauline; Moran, Christopher; Bed'Hom, Bertrand; Abzhanov, Arhat; Burguess, Shane C.; Cooksey, Amanda M.; Castoe, Todd A.; Crawford, Nicholas G.; Densmore, Llewellyn D.; Drew, Jennifer C.; Edwards, Scott V.; Faircloth, Brant C.; Fujita, Matthew K.; Greenwold, Matthew J.; Hoffman, Federico G.; Howard, Jonathan M.; Iguchi, Taisen; Janes, Daniel E.; Khan, Shaid Yar; Kohno, Satomi; deKoning, AP Jason; Lance, Stacey L.; McCarthy, Fiona M.; McCormack, John E.; Merchant, Mark E.; Peterson, Daniel G.; Pollock, David D.; Pourmand, Nader; Raney, Brian J.; Roessler, Kyria A.; Sanford, Jeremy R.; Sawyer, Roger H.; Schmidt, Carl J.; Triplett, Eric W.; Tuberville, Tracey D.; Venegas-Anaya, Miryam D.; Howard, Jason T.; Jarvis, Erich D.; Guillette Jr., Louis J.; Glenn, Travis C.; Green, Richard E.; Ray, David A. (2012)
  • Specimen collection is essential for modern science 
    Nachman, Michael W.; Beckman, Elizabeth J.; Bowie, Rauri Ck; Cicero, Carla; Conroy, Chris J.; Dudley, Robert; Hayes, Tyrone B.; Koo, Michelle S.; Lacey, Eileen A.; Martin, Christopher H.; McGuire, Jimmy A.; Patton, James L.; Spencer, Carol L.; Tarvin, Rebecca D.; Wake, Marvalee H.; Wang, Ian J.; Achmadi, Anang; Álvarez-Castañeda, Sergio Ticul; Andersen, Michael J.; Arroyave, Jairo; Austin, Christopher C.; Barker, F. K.; Barrow, Lisa N.; Barrowclough, George F.; Bates, John; Bauer, Aaron M.; Bell, Kayce C.; Bell, Rayna C.; Bronson, Allison W.; Brown, Rafe M.; Burbrink, Frank T.; Burns, Kevin J.; Cadena, Carlos Daniel; Cannatella, David C.; Castoe, Todd A.; Chakrabarty, Prosanta; Colella, Jocelyn P.; Cook, Joseph A.; Cracraft, Joel L.; Davis, Drew R.; Davis Rabosky, Alison R.; D’Elía, Guillermo; Dumbacher, John P.; Dunnum, Jonathan L.; Edwards, Scott V.; Esselstyn, Jacob A.; Faivovich, Julián; Fjeldså, Jon; Flores-Villela, Oscar; Ford, Kassandra; Fuchs, Jérôme; Fujita, Matthew K.; Good, Jeffrey M.; Greenbaum, Eli; Greene, Harry W.; Hackett, Shannon; Hamidy, Amir; Hanken, James; Haryoko, Tri; Hawkins, Melissa Tr; Heaney, Lawrence R.; Hillis, David M.; Hollingsworth, Bradford D.; Hornsby, Angela D.; Hosner, Peter A.; Irham, Mohammad; Jansa, Sharon; Jiménez, Rosa Alicia; Joseph, Leo; Kirchman, Jeremy J.; LaDuc, Travis J.; Leaché, Adam D.; Lessa, Enrique P.; López-Fernández, Hernán; Mason, Nicholas A.; McCormack, John E.; McMahan, Caleb D.; Moyle, Robert G.; Ojeda, Ricardo A.; Olson, Link E.; Kin Onn, Chan; Parenti, Lynne R.; Parra-Olea, Gabriela; Patterson, Bruce D.; Pauly, Gregory B.; Pavan, Silvia E.; Peterson, A. T.; Poe, Steven; Rabosky, Daniel L.; Raxworthy, Christopher J.; Reddy, Sushma; Rico-Guevara, Alejandro; Riyanto, Awal; Rocha, Luiz A.; Ron, Santiago R.; Rovito, Sean M.; Rowe, Kevin C.; Rowley, Jodi; Ruane, Sara; Salazar-Valenzuela, David; Shultz, Allison J.; Sidlauskas, Brian; Sikes, Derek S.; Simmons, Nancy B.; Stiassny, Melanie L. J.; Streicher, Jeffrey W.; Stuart, Bryan L.; Summers, Adam P.; Tavera, Jose; Teta, Pablo; Thompson, Cody W.; Timm, Robert M.; Torres-Carvajal, Omar; Voelker, Gary; Voss, Robert S.; Winker, Kevin; Witt, Christopher; Wommack, Elizabeth A.; Zink, Robert M. (2023)
  • The tuatara genome reveals ancient features of amniote evolution 
    Gemmell, Neil J.; Rutherford, Kim; Prost, Stefan; Tollis, Marc; Winter, David; Macey, J. R.; Adelson, David L.; Suh, Alexander; Bertozzi, Terry; Grau, José H.; Organ, Chris; Gardner, Paul P.; Muffato, Matthieu; Patricio, Mateus; Billis, Konstantinos; Martin, Fergal J.; Flicek, Paul; Petersen, Bent; Kang, Lin; Michalak, Pawel; Buckley, Thomas R.; Wilson, Melissa; Cheng, Yuanyuan; Miller, Hilary; Schott, Ryan K.; Jordan, Melissa D.; Newcomb, Richard D.; Arroyo, José Ignacio; Valenzuela, Nicole; Hore, Tim A.; Renart, Jaime; Peona, Valentina; Peart, Claire R.; Warmuth, Vera M.; Zeng, Lu; Kortschak, R. D.; Raison, Joy M.; Zapata, Valeria Velásquez; Wu, Zhiqiang; Santesmasses, Didac; Mariotti, Marco; Guigó, Roderic; Rupp, Shawn M.; Twort, Victoria G.; Dussex, Nicolas; Taylor, Helen; Abe, Hideaki; Bond, Donna M.; Paterson, James M.; Mulcahy, Daniel G.; González, Vanessa L.; Barbieri, Charles G.; DeMeo, Dustin P.; Pabinger, Stephan; Van Stijn, Tracey; Clarke, Shannon; Ryder, Oliver; Edwards, Scott V.; Salzberg, Steven L.; Anderson, Lindsay; Nelson, Nicola; Stone, Clive (2020)
  • Whole-genome analyses resolve early branches in the tree of life of modern birds 
    Jarvis, Erich D.; Mirarab, Siavash; Aberer, Andre J.; Li, Bo; Houde, Peter; Li, Cai; Ho, Simon Y. W.; Faircloth, Brant C.; Nabholz, Benoit; Howard, Jason T.; Suh, Alexander; Weber, Claudia C.; Fonseca, Rute R. da; Li, Jianwen; Zhang, Fang; Li, Hui; Zhou, Long; Narula, Nitish; Liu, Liang; Ganapathy, Ganesh; Boussau, Bastien; Bayzid, Md Shamsuzzoha; Zavidovych, Volodymyr; Subramanian, Sankar; Gabaldón, Toni; Capella-Gutiérrez, Salvador; Huerta-Cepas, Jaime; Rekepalli, Bhanu; Munch, Kasper; Schierup, Mikkel; Lindow, Bent; Warren, Wesley C.; Ray, David; Green, Richard E.; Bruford, Michael W.; Zhan, Xiangjiang; Dixon, Andrew; Li, Shengbin; Li, Ning; Huang, Yinhua; Derryberry, Elizabeth P.; Bertelsen, Mads Frost; Sheldon, Frederick H.; Brumfield, Robb T.; Mello, Claudio V.; Lovell, Peter V.; Wirthlin, Morgan; Schneider, Maria Paula Cruz; Prosdocimi, Francisco; Samaniego, José Alfredo; Velazquez, Amhed Missael Vargas; Alfaro-Núñez, Alonzo; Campos, Paula F.; Petersen, Bent; Sicheritz-Ponten, Thomas; Pas, An; Bailey, Tom; Scofield, Paul; Bunce, Michael; Lambert, David M.; Zhou, Qi; Perelman, Polina; Driskell, Amy C.; Shapiro, Beth; Xiong, Zijun; Zeng, Yongli; Liu, Shiping; Li, Zhenyu; Liu, Binghang; Wu, Kui; Xiao, Jin; Yinqi, Xiong; Zheng, Qiuemei; Zhang, Yong; Yang, Huanming; Wang, Jian; Smeds, Linnea; Rheindt, Frank E.; Braun, Michael J.; Fjeldsa, Jon; Orlando, Ludovic; Barker, F. K.; Jønsson, Knud Andreas; Johnson, Warren E.; Koepfli, Klaus-Peter; O'Brien, Stephen; Haussler, David; Ryder, Oliver A.; Rahbek, Carsten; Willerslev, Eske; Graves, Gary R.; Glenn, Travis C.; McCormack, John; Burt, Dave; Ellegren, Hans; Alström, Per; Edwards, Scott V.; Stamatakis, Alexandros; Mindell, David P.; Cracraft, Joel; Braun, Edward L.; Warnow, Tandy; Jun, Wang; Gilbert, M. T.; Zhang, Guojie (2014)
    To better determine the history of modern birds, we performed a genome-scale phylogenetic analysis of 48 species representing all orders of Neoaves using phylogenomic methods created to handle genome-scale data. We recovered ...
  • Why sequence all eukaryotes? 
    Blaxter, Mark; Archibald, John M.; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Di Palma, Federica; Durbin, Richard; Edwards, Scott V.; Graves, Jennifer A. M.; Hackett, Kevin J.; Hall, Neil; Jarvis, Erich D.; Johnson, Rebecca N.; Karlsson, Elinor K.; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Lindblad-Toh, Kerstin; Lopez, Jose V.; Moran, Nancy A.; Robinson, Gene E.; Ryder, Oliver A.; Shapiro, Beth; Soltis, Pamela S.; Warnow, Tandy; Zhang, Guojie; Lewin, Harris A. (2022)
    Life on Earth has evolved from initial simplicity to the astounding complexity we experience today. Bacteria and archaea have largely excelled in metabolic diversification, but eukaryotes additionally display abundant ...

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