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Browsing by Author "Counterman, Brian A."

Browsing by Author "Counterman, Brian A."

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  • Ogilvie, James G.; Van Belleghem, Steven; Range, Ryan; Papa, Riccardo; McMillan, W. O.; Chouteau, Mathieu; Counterman, Brian A. (2021)
  • Dasmahapatra, Kanchon K.; Walters, James R.; Briscoe, Adriana D.; Davey, John W.; Whibley, Annabel; Nadeau, Nicola J.; Zimin, Aleksey V.; Hughes, Daniel S. T.; Ferguson, Laura C.; Martin, Simon H.; Salazar, Camilo; Lewis, James J.; Adler, Sebastian; Ahn, Seung-Joon; Baker, Dean A.; Baxter, Simon W.; Chamberlain, Nicola L.; Chauhan, Ritika; Counterman, Brian A.; Dalmay, Tamas; Gilbert, Lawrence E.; Gordon, Karl; Heckel, David G.; Hines, Heather M.; Hoff, Katharina J.; Holland, Peter W. H.; Jacquin-Joly, Emmanuelle; Jiggins, Francis M.; Jones, Robert T.; Kapan, Durrell D.; Kersey, Paul; Lamas, Gerardo; Lawson, Daniel; Mapleson, Daniel; Maroja, Luana S.; Martin, Arnaud; Moxon, Simon; Palmer, William J.; Papa, Riccardo; Papanicolaou, Alexie; Pauchet, Yannick; Ray, David A.; Rosser, Neil; Salzberg, Steven L.; Supple, Megan A.; Surridge, Alison; Tenger-Trolander, Ayse; Vogel, Heiko; Wilkinson, Paul A.; Wilson, Derek; Yorke, James A.; Yuan, Furong; Balmuth, Alexi L.; Eland, Cathlene; Gharbi, Karim; Thomson, Marian; Gibbs, Richard A.; Han, Yi; Jayaseelan, Joy C.; Kovar, Christie; Mathew, Tittu; Muzny, Donna M.; Ongeri, Fiona; Pu, Ling-Ling; Qu, Jiaxin; Thornton, Rebecca L.; Worley, Kim C.; Wu, Yuan-Qing; Linares, Mauricio; Blaxter, Mark L.; Ffrench-Constant, Richard H.; Joron, Mathieu; Kronforst, Marcus R.; Mullen, Sean P.; Reed, Robert D.; Scherer, Steven E.; Richards, Stephen; Mallet, James; McMillan, William Owen; Jiggins, Chris D. (2012)
    The evolutionary importance of hybridization and introgression has long been debated(1). Hybrids are usually rare and unfit, but even infrequent hybridization can aid adaptation by transferring beneficial traits between ...
  • Zhang, Wei; Leon-Ricardo, Brian; van Schooten, Bas; Van Belleghem, Steven M.; Counterman, Brian A.; McMillan, W. O.; Kronforst, Marcus R.; Papa, Riccardo (2019)
    Butterfly eyes are complex organs that are composed of a diversity of proteins and they play a central role in visual signaling and ultimately, speciation and adaptation. Here, we utilized the whole eye transcriptome to ...
  • Van Belleghem, Steven M.; Rastas, Pasi; Papanicolaou, Alexie; Martin, Simon H.; Arias, Carlos F.; Supple, Megan A.; Hanly, Joseph J.; Mallet, James; Lewis, James J.; Hines, Heather M.; Ruiz, Mayte; Salazar, Camilo; Linares, Mauricio; Moreira, Gilson R. P.; Jiggins, Chris D.; Counterman, Brian A.; McMillan, W. O.; Papa, Riccardo (2017)
    Identifying the genomic changes that control morphological variation and understanding how they generate diversity is a major goal of evolutionary biology. In Heliconius butterflies, a small number of genes control the ...
  • Supple, Megan A.; Papa, Riccardo; Hines, Heather M.; McMillan, W. O.; Counterman, Brian A. (2015)
    A key to understanding the origins of species is determining the evolutionary processes that drive the patterns of genomic divergence during speciation. New genomic technologies enable the study of high-resolution genomic ...
  • Martin, Arnaud; Papa, Riccardo; Nadeau, Nicola J.; Hill, Ryan I.; Counterman, Brian A.; Halder, Georg; Jiggins, Chris D.; Kronforst, Marcus R.; Long, Anthony D.; McMillan, William Owen; Reed, Robert D. (2012)
    Although animals display a rich variety of shapes and patterns, the genetic changes that explain how complex forms arise are still unclear. Here we take advantage of the extensive diversity of Heliconius butterflies to ...
  • Edelman, Nathaniel B.; Frandsen, Paul B.; Miyagi, Michael; Clavijo, Bernardo; Davey, John; Dikow, Rebecca B.; Garcia-Accinelli, Gonzalo; Van Belleghem, Steven M.; Patterson, Nick; Neafsey, Daniel E.; Challis, Richard; Kumar, Sujai; Moreira, Gilson R. P.; Salazar, Camilo; Chouteau, Mathieu; Counterman, Brian A.; Papa, Riccardo; Blaxter, Mark; Reed, Robert D.; Dasmahapatra, Kanchon K.; Kronforst, Marcus; Joron, Mathieu; Jiggins, Chris D.; McMillan, W. Owen; Di Palma, Federica; Blumberg, Andrew J.; Wakeley, John; Jaffe, David; Mallet, James (2019)
    We used 20 de novo genome assemblies to probe the speciation history and architecture of gene flow in rapidly radiating Heliconius butterflies. Our tests to distinguish incomplete lineage sorting from introgression indicate ...
  • Supple, Megan A.; Hines, Heather M.; Dasmahapatra, Kanchon K.; Lewis, James J.; Nielsen, Dahlia M.; Lavoie, Christine; Ray, David A.; Salazar, Camilo; McMillan, William Owen; Counterman, Brian A. (2013)
    Identifying the genetic changes driving adaptive variation in natural populations is key to understanding the origins of biodiversity. The mosaic of mimetic wing patterns in Heliconius butterflies makes an excellent system ...
  • Baxter, Simon W.; Nadeau, Nicola J.; Maroja, Luana; Wilkinson, Paul; Counterman, Brian A.; Dawson, Anna; Beltran, Margarita; Perez-Espona, Silvia; Chamberlain, Nicola; Ferguson, Laura; Clark, Richard; Davidson, Claire; Glithero, Rebecca; Mallet, James; McMillan, William Owen; Kronforst, Marcus; Joron, Mathieu; Ffrench-Constant, Richard H.; Jiggins, Chris D. (2010)
    Wing patterning in Heliconius butterflies is a longstanding example of both Mullerian mimicry and phenotypic radiation under strong natural selection. The loci controlling such patterns are "hotspots" for adaptive ...
  • Supple, Megan; Papa, Riccardo; Counterman, Brian A.; McMillan, William Owen (Springer Netherlands, 2014)
  • Van Belleghem, Steven M.; Ruggieri, Angelo A.; Concha, Carolina; Livraghi, Luca; Hebberecht, Laura; Rivera, Edgardo Santiago; Ogilvie, James G.; Hanly, Joseph J.; Warren, Ian A.; Planas, Silvia; Ortiz-Ruiz, Yadira; Reed, Robert; Lewis, James J.; Jiggins, Chris D.; Counterman, Brian A.; McMillan, W. O.; Papa, Riccardo (2023)
    Little is known about the extent to which species use homologous regulatory architectures to achieve phenotypic convergence. By characterizing chromatin accessibility and gene expression in developing wing tissues, we ...
  • Concha, Carolina; Wallbank, Richard W. R.; Hanly, Joseph J.; Fenner, Jennifer; Livraghi, Luca; Rivera, Edgardo Santiago; Paulo, Daniel F.; Arias, Carlos; Vargas, Marta; Sanjeev, Manu; Morrison, Colin; Tian, David; Aguirre, Paola; Ferrara, Sabrina; Foley, Jessica; Pardo-Diaz, Carolina; Salazar, Camilo; Linares, Mauricio; Massardo, Darli; Counterman, Brian A.; Scott, Maxwell J.; Jiggins, Chris D.; Papa, Riccardo; Martin, Arnaud; McMillan, W. O. (2019)
    To what extent can we predict how evolution occurs? Do genetic architectures and developmental processes canalize the evolution of similar outcomes in a predictable manner? Or do historical contingencies impose alternative ...
  • Papa, Riccardo; Kapan, Durrell D.; Counterman, Brian A.; Maldonado, Karla; Lindstrom, Daniel P.; Reed, Robert D.; Nijhout, H. F.; Hrbek, Tomas; McMillan, William Owen (2013)
  • Reed, Robert D.; Papa, Riccardo; Martin, Arnaud; Hines, Heather M.; Counterman, Brian A.; Pardo-Diaz, Carolina; Jiggins, Chris D.; Chamberlain, Nicola L.; Kronforst, Marcus R.; Chen, Rui; Halder, Georg; Nijhout, H. Frederik; McMillan, William Owen (2011)
    Mimicry whereby warning signals in different species evolve to look similar has long served as a paradigm of convergent evolution. Little is known, however, about the genes that underlie the evolution of mimetic phenotypes ...
  • Lewis, James J.; Geltman, Rachel C.; Pollak, Patrick C.; Rondem, Kathleen E.; Van Belleghem, Steven M.; Hubisz, Melissa J.; Munn, Paul R.; Zhang, Linlin; Benson, Caleb; Mazo-Vargas, Anyi; Danko, Charles G.; Counterman, Brian A.; Papa, Riccardo; Reed, Robert D. (2019)
    Color pattern mimicry in Heliconius butterflies is a classic case study of complex trait adaptation via selection on a few large effect genes. Association studies have linked color pattern variation to a handful of noncoding ...
  • Van Belleghem, Steven M.; Papa, Riccardo; Ortiz-Zuazaga, Humberto; Hendrickx, Frederik; Jiggins, Chris D.; McMillan, W. O.; Counterman, Brian A. (2018)
    The use of image data to quantify, study and compare variation in the colors and patterns of organisms requires the alignment of images to establish homology, followed by color-based segmentation of images. Here we describe ...
  • Van Belleghem, Steven M.; Baquero, Margarita; Papa, Riccardo; Salazar, Camilo; McMillan, W. O.; Counterman, Brian A.; Jiggins, Chris D.; Martin, Simon H. (2018)
    Sex chromosomes are disproportionately involved in reproductive isolation and adaptation. In support of such a 'large-X' effect, genome scans between recently diverged populations or species pairs often identify ...
  • Van Belleghem, Steven M.; Alicea Roman, Paola A.; Carbia Gutierrez, Heriberto; Counterman, Brian A.; Papa, Riccardo (2020)
  • Van Belleghem, Steven M.; Cole, Jared M.; Montejo-Kovacevich, Gabriela; Bacquet, Caroline N.; McMillan, W. Owen; Papa, Riccardo; Counterman, Brian A. (2021)
    Hybridizing species provide a powerful system to identify the processes that shape genomic variation and maintain species boundaries. However, complex histories of isolation, gene flow, and selection often generate ...
  • Hines, Heather M.; Counterman, Brian A.; Papa, Riccardo; de Moura, Priscila Albuquerque; Cardoso, Marcio Z.; Linares, Mauricio; Mallet, James; Reed, Robert D.; Jiggins, Chris D.; Kronforst, Marcus R.; McMillan, W. Owen (2012)
    The mimetic butterflies Heliconius erato and Heliconius melpomene have undergone parallel radiations to form a near-identical patchwork of over 20 different wing-pattern races across the Neotropics. Previous molecular ...

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